Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14675 | 44248;44249;44250 | chr2:178630935;178630934;178630933 | chr2:179495662;179495661;179495660 |
N2AB | 13034 | 39325;39326;39327 | chr2:178630935;178630934;178630933 | chr2:179495662;179495661;179495660 |
N2A | 12107 | 36544;36545;36546 | chr2:178630935;178630934;178630933 | chr2:179495662;179495661;179495660 |
N2B | 5610 | 17053;17054;17055 | chr2:178630935;178630934;178630933 | chr2:179495662;179495661;179495660 |
Novex-1 | 5735 | 17428;17429;17430 | chr2:178630935;178630934;178630933 | chr2:179495662;179495661;179495660 |
Novex-2 | 5802 | 17629;17630;17631 | chr2:178630935;178630934;178630933 | chr2:179495662;179495661;179495660 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.999 | D | 0.629 | 0.433 | 0.577140404891 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1384628153 | None | 0.985 | N | 0.32 | 0.192 | 0.427368086475 | gnomAD-4.0.0 | 2.0558E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.83818E-05 | 0 | None | 0 | 0 | 1.80004E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9573 | likely_pathogenic | 0.9382 | pathogenic | -1.338 | Destabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
I/C | 0.9792 | likely_pathogenic | 0.9699 | pathogenic | -0.906 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
I/D | 0.991 | likely_pathogenic | 0.9862 | pathogenic | -0.687 | Destabilizing | 0.999 | D | 0.664 | prob.neutral | None | None | None | None | N |
I/E | 0.9747 | likely_pathogenic | 0.9633 | pathogenic | -0.7 | Destabilizing | 0.999 | D | 0.667 | prob.neutral | None | None | None | None | N |
I/F | 0.6433 | likely_pathogenic | 0.5638 | ambiguous | -0.957 | Destabilizing | 0.999 | D | 0.617 | neutral | D | 0.565267949 | None | None | N |
I/G | 0.9849 | likely_pathogenic | 0.9774 | pathogenic | -1.63 | Destabilizing | 0.999 | D | 0.685 | prob.delet. | None | None | None | None | N |
I/H | 0.9837 | likely_pathogenic | 0.9746 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.724 | deleterious | None | None | None | None | N |
I/K | 0.9482 | likely_pathogenic | 0.9259 | pathogenic | -0.955 | Destabilizing | 0.999 | D | 0.668 | prob.neutral | None | None | None | None | N |
I/L | 0.4198 | ambiguous | 0.3677 | ambiguous | -0.628 | Destabilizing | 0.985 | D | 0.376 | neutral | N | 0.439865128 | None | None | N |
I/M | 0.3141 | likely_benign | 0.2694 | benign | -0.565 | Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.526525433 | None | None | N |
I/N | 0.8943 | likely_pathogenic | 0.8488 | pathogenic | -0.778 | Destabilizing | 0.999 | D | 0.73 | deleterious | D | 0.56339073 | None | None | N |
I/P | 0.9662 | likely_pathogenic | 0.9426 | pathogenic | -0.832 | Destabilizing | 0.999 | D | 0.73 | deleterious | None | None | None | None | N |
I/Q | 0.9727 | likely_pathogenic | 0.9581 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.696 | prob.delet. | None | None | None | None | N |
I/R | 0.941 | likely_pathogenic | 0.9126 | pathogenic | -0.404 | Destabilizing | 0.999 | D | 0.731 | deleterious | None | None | None | None | N |
I/S | 0.9537 | likely_pathogenic | 0.9325 | pathogenic | -1.35 | Destabilizing | 0.999 | D | 0.616 | neutral | D | 0.555825307 | None | None | N |
I/T | 0.9342 | likely_pathogenic | 0.9135 | pathogenic | -1.239 | Destabilizing | 0.999 | D | 0.629 | neutral | D | 0.562204063 | None | None | N |
I/V | 0.2323 | likely_benign | 0.2235 | benign | -0.832 | Destabilizing | 0.985 | D | 0.32 | neutral | N | 0.443599022 | None | None | N |
I/W | 0.9757 | likely_pathogenic | 0.966 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
I/Y | 0.922 | likely_pathogenic | 0.8934 | pathogenic | -0.792 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.