Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14680 | 44263;44264;44265 | chr2:178630920;178630919;178630918 | chr2:179495647;179495646;179495645 |
N2AB | 13039 | 39340;39341;39342 | chr2:178630920;178630919;178630918 | chr2:179495647;179495646;179495645 |
N2A | 12112 | 36559;36560;36561 | chr2:178630920;178630919;178630918 | chr2:179495647;179495646;179495645 |
N2B | 5615 | 17068;17069;17070 | chr2:178630920;178630919;178630918 | chr2:179495647;179495646;179495645 |
Novex-1 | 5740 | 17443;17444;17445 | chr2:178630920;178630919;178630918 | chr2:179495647;179495646;179495645 |
Novex-2 | 5807 | 17644;17645;17646 | chr2:178630920;178630919;178630918 | chr2:179495647;179495646;179495645 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.856 | N | 0.756 | 0.406 | 0.222439326576 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/L | None | None | 0.954 | D | 0.845 | 0.337 | 0.395143324098 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1448 | likely_benign | 0.1292 | benign | -1.005 | Destabilizing | 0.856 | D | 0.756 | deleterious | N | 0.492352789 | None | None | N |
P/C | 0.7191 | likely_pathogenic | 0.639 | pathogenic | -0.518 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
P/D | 0.6552 | likely_pathogenic | 0.5742 | pathogenic | -0.771 | Destabilizing | 0.965 | D | 0.869 | deleterious | None | None | None | None | N |
P/E | 0.4507 | ambiguous | 0.3999 | ambiguous | -0.849 | Destabilizing | 0.965 | D | 0.774 | deleterious | None | None | None | None | N |
P/F | 0.7223 | likely_pathogenic | 0.6206 | pathogenic | -0.967 | Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
P/G | 0.4539 | ambiguous | 0.4182 | ambiguous | -1.226 | Destabilizing | 0.965 | D | 0.757 | deleterious | None | None | None | None | N |
P/H | 0.2724 | likely_benign | 0.2306 | benign | -0.781 | Destabilizing | 0.994 | D | 0.855 | deleterious | N | 0.454682987 | None | None | N |
P/I | 0.5792 | likely_pathogenic | 0.5004 | ambiguous | -0.539 | Destabilizing | 0.982 | D | 0.892 | deleterious | None | None | None | None | N |
P/K | 0.4105 | ambiguous | 0.4034 | ambiguous | -0.835 | Destabilizing | 0.797 | D | 0.813 | deleterious | None | None | None | None | N |
P/L | 0.2279 | likely_benign | 0.1745 | benign | -0.539 | Destabilizing | 0.954 | D | 0.845 | deleterious | D | 0.55497792 | None | None | N |
P/M | 0.548 | ambiguous | 0.4802 | ambiguous | -0.332 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
P/N | 0.4943 | ambiguous | 0.4334 | ambiguous | -0.446 | Destabilizing | 0.965 | D | 0.865 | deleterious | None | None | None | None | N |
P/Q | 0.2303 | likely_benign | 0.2148 | benign | -0.703 | Destabilizing | 0.965 | D | 0.864 | deleterious | None | None | None | None | N |
P/R | 0.2466 | likely_benign | 0.2335 | benign | -0.249 | Destabilizing | 0.041 | N | 0.507 | neutral | N | 0.515198667 | None | None | N |
P/S | 0.224 | likely_benign | 0.1776 | benign | -0.858 | Destabilizing | 0.954 | D | 0.749 | deleterious | N | 0.513340396 | None | None | N |
P/T | 0.2059 | likely_benign | 0.1723 | benign | -0.841 | Destabilizing | 0.954 | D | 0.809 | deleterious | N | 0.515198667 | None | None | N |
P/V | 0.4223 | ambiguous | 0.366 | ambiguous | -0.659 | Destabilizing | 0.965 | D | 0.853 | deleterious | None | None | None | None | N |
P/W | 0.8386 | likely_pathogenic | 0.76 | pathogenic | -1.08 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
P/Y | 0.6324 | likely_pathogenic | 0.5384 | ambiguous | -0.812 | Destabilizing | 0.998 | D | 0.874 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.