Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14688 | 44287;44288;44289 | chr2:178630896;178630895;178630894 | chr2:179495623;179495622;179495621 |
N2AB | 13047 | 39364;39365;39366 | chr2:178630896;178630895;178630894 | chr2:179495623;179495622;179495621 |
N2A | 12120 | 36583;36584;36585 | chr2:178630896;178630895;178630894 | chr2:179495623;179495622;179495621 |
N2B | 5623 | 17092;17093;17094 | chr2:178630896;178630895;178630894 | chr2:179495623;179495622;179495621 |
Novex-1 | 5748 | 17467;17468;17469 | chr2:178630896;178630895;178630894 | chr2:179495623;179495622;179495621 |
Novex-2 | 5815 | 17668;17669;17670 | chr2:178630896;178630895;178630894 | chr2:179495623;179495622;179495621 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs2059718388 | None | 0.999 | D | 0.679 | 0.372 | 0.214338557667 | gnomAD-4.0.0 | 3.42218E-06 | None | None | None | None | N | None | 0 | 6.71231E-05 | None | 0 | 0 | None | 0 | 1.73671E-04 | 0 | 0 | 1.65744E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7695 | likely_pathogenic | 0.6238 | pathogenic | -0.761 | Destabilizing | 0.997 | D | 0.711 | prob.delet. | N | 0.483502544 | None | None | N |
E/C | 0.9972 | likely_pathogenic | 0.9949 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.701 | prob.delet. | None | None | None | None | N |
E/D | 0.9205 | likely_pathogenic | 0.8418 | pathogenic | -1.165 | Destabilizing | 0.997 | D | 0.621 | neutral | N | 0.438869061 | None | None | N |
E/F | 0.9974 | likely_pathogenic | 0.9943 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.672 | prob.neutral | None | None | None | None | N |
E/G | 0.8588 | likely_pathogenic | 0.7481 | pathogenic | -1.105 | Destabilizing | 0.999 | D | 0.599 | neutral | D | 0.591167343 | None | None | N |
E/H | 0.9933 | likely_pathogenic | 0.9834 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.687 | prob.delet. | None | None | None | None | N |
E/I | 0.962 | likely_pathogenic | 0.9185 | pathogenic | 0.165 | Stabilizing | 0.999 | D | 0.693 | prob.delet. | None | None | None | None | N |
E/K | 0.9128 | likely_pathogenic | 0.8161 | pathogenic | -0.699 | Destabilizing | 0.997 | D | 0.728 | deleterious | D | 0.550674612 | None | None | N |
E/L | 0.9757 | likely_pathogenic | 0.9469 | pathogenic | 0.165 | Stabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
E/M | 0.9736 | likely_pathogenic | 0.9434 | pathogenic | 0.588 | Stabilizing | 1.0 | D | 0.687 | prob.delet. | None | None | None | None | N |
E/N | 0.9784 | likely_pathogenic | 0.9488 | pathogenic | -1.049 | Destabilizing | 0.999 | D | 0.693 | prob.delet. | None | None | None | None | N |
E/P | 0.9755 | likely_pathogenic | 0.9482 | pathogenic | -0.122 | Destabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/Q | 0.7869 | likely_pathogenic | 0.6417 | pathogenic | -0.93 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | D | 0.589190138 | None | None | N |
E/R | 0.9533 | likely_pathogenic | 0.906 | pathogenic | -0.464 | Destabilizing | 0.999 | D | 0.693 | prob.delet. | None | None | None | None | N |
E/S | 0.9456 | likely_pathogenic | 0.8883 | pathogenic | -1.337 | Destabilizing | 0.998 | D | 0.727 | deleterious | None | None | None | None | N |
E/T | 0.9568 | likely_pathogenic | 0.9065 | pathogenic | -1.064 | Destabilizing | 0.999 | D | 0.689 | prob.delet. | None | None | None | None | N |
E/V | 0.8955 | likely_pathogenic | 0.797 | pathogenic | -0.122 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.460389333 | None | None | N |
E/W | 0.9994 | likely_pathogenic | 0.9985 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.699 | prob.delet. | None | None | None | None | N |
E/Y | 0.9956 | likely_pathogenic | 0.99 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.66 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.