Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14690 | 44293;44294;44295 | chr2:178630890;178630889;178630888 | chr2:179495617;179495616;179495615 |
N2AB | 13049 | 39370;39371;39372 | chr2:178630890;178630889;178630888 | chr2:179495617;179495616;179495615 |
N2A | 12122 | 36589;36590;36591 | chr2:178630890;178630889;178630888 | chr2:179495617;179495616;179495615 |
N2B | 5625 | 17098;17099;17100 | chr2:178630890;178630889;178630888 | chr2:179495617;179495616;179495615 |
Novex-1 | 5750 | 17473;17474;17475 | chr2:178630890;178630889;178630888 | chr2:179495617;179495616;179495615 |
Novex-2 | 5817 | 17674;17675;17676 | chr2:178630890;178630889;178630888 | chr2:179495617;179495616;179495615 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.986 | N | 0.682 | 0.352 | 0.288352970974 | gnomAD-4.0.0 | 1.59243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78164E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.952 | N | 0.585 | 0.331 | 0.21737058555 | gnomAD-4.0.0 | 1.59245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86025E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4752 | ambiguous | 0.3806 | ambiguous | -0.529 | Destabilizing | 0.952 | D | 0.657 | prob.neutral | D | 0.536176983 | None | None | N |
E/C | 0.9834 | likely_pathogenic | 0.9719 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
E/D | 0.2789 | likely_benign | 0.2458 | benign | -0.68 | Destabilizing | 0.058 | N | 0.247 | neutral | N | 0.433776786 | None | None | N |
E/F | 0.987 | likely_pathogenic | 0.9748 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/G | 0.4559 | ambiguous | 0.3032 | benign | -0.769 | Destabilizing | 0.986 | D | 0.682 | prob.neutral | N | 0.434108826 | None | None | N |
E/H | 0.9148 | likely_pathogenic | 0.8574 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
E/I | 0.9521 | likely_pathogenic | 0.9188 | pathogenic | 0.084 | Stabilizing | 0.995 | D | 0.8 | deleterious | None | None | None | None | N |
E/K | 0.5318 | ambiguous | 0.3593 | ambiguous | 0.042 | Stabilizing | 0.952 | D | 0.585 | neutral | N | 0.471901188 | None | None | N |
E/L | 0.9312 | likely_pathogenic | 0.8849 | pathogenic | 0.084 | Stabilizing | 0.995 | D | 0.752 | deleterious | None | None | None | None | N |
E/M | 0.8884 | likely_pathogenic | 0.8381 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.739 | deleterious | None | None | None | None | N |
E/N | 0.6424 | likely_pathogenic | 0.5514 | ambiguous | -0.212 | Destabilizing | 0.979 | D | 0.69 | prob.delet. | None | None | None | None | N |
E/P | 0.9958 | likely_pathogenic | 0.9847 | pathogenic | -0.099 | Destabilizing | 0.995 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Q | 0.3481 | ambiguous | 0.2882 | benign | -0.183 | Destabilizing | 0.993 | D | 0.672 | prob.neutral | N | 0.494073256 | None | None | N |
E/R | 0.7391 | likely_pathogenic | 0.5767 | pathogenic | 0.149 | Stabilizing | 0.995 | D | 0.642 | neutral | None | None | None | None | N |
E/S | 0.5342 | ambiguous | 0.4505 | ambiguous | -0.408 | Destabilizing | 0.963 | D | 0.6 | neutral | None | None | None | None | N |
E/T | 0.7481 | likely_pathogenic | 0.6393 | pathogenic | -0.22 | Destabilizing | 0.995 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/V | 0.8149 | likely_pathogenic | 0.7361 | pathogenic | -0.099 | Destabilizing | 0.993 | D | 0.729 | deleterious | D | 0.579856499 | None | None | N |
E/W | 0.9965 | likely_pathogenic | 0.9915 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/Y | 0.9713 | likely_pathogenic | 0.9445 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.