Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1469344302;44303;44304 chr2:178630881;178630880;178630879chr2:179495608;179495607;179495606
N2AB1305239379;39380;39381 chr2:178630881;178630880;178630879chr2:179495608;179495607;179495606
N2A1212536598;36599;36600 chr2:178630881;178630880;178630879chr2:179495608;179495607;179495606
N2B562817107;17108;17109 chr2:178630881;178630880;178630879chr2:179495608;179495607;179495606
Novex-1575317482;17483;17484 chr2:178630881;178630880;178630879chr2:179495608;179495607;179495606
Novex-2582017683;17684;17685 chr2:178630881;178630880;178630879chr2:179495608;179495607;179495606
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Ig-98
  • Domain position: 19
  • Structural Position: 29
  • Q(SASA): 0.7588
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs200445568 -0.114 1.0 N 0.613 0.369 None gnomAD-2.1.1 2.32251E-04 None None None None N None 2.35693E-03 1.41483E-04 None 0 0 None 3.27E-05 None 0 1.56E-05 0
R/C rs200445568 -0.114 1.0 N 0.613 0.369 None gnomAD-3.1.2 7.56479E-04 None None None None N None 2.51123E-03 4.59559E-04 0 0 0 None 0 0 1.47E-05 0 1.43678E-03
R/C rs200445568 -0.114 1.0 N 0.613 0.369 None 1000 genomes 5.99042E-04 None None None None N None 2.3E-03 0 None None 0 0 None None None 0 None
R/C rs200445568 -0.114 1.0 N 0.613 0.369 None gnomAD-4.0.0 1.50009E-04 None None None None N None 2.50733E-03 2.33505E-04 None 0 0 None 0 1.65235E-04 1.27171E-05 4.393E-05 3.20277E-04
R/H rs746380621 -0.659 1.0 N 0.644 0.291 0.146414634003 gnomAD-2.1.1 6.79E-05 None None None None N None 0 2.83E-05 None 9.67E-05 6.71141E-04 None 6.54E-05 None 0 7.81E-06 1.40568E-04
R/H rs746380621 -0.659 1.0 N 0.644 0.291 0.146414634003 gnomAD-3.1.2 5.26E-05 None None None None N None 2.41E-05 0 0 2.88517E-04 3.87747E-04 None 0 0 4.41E-05 2.06954E-04 0
R/H rs746380621 -0.659 1.0 N 0.644 0.291 0.146414634003 gnomAD-4.0.0 4.71128E-05 None None None None N None 2.67058E-05 5.0045E-05 None 4.05625E-04 4.69211E-04 None 0 0 1.69563E-05 1.31775E-04 9.612E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.3385 likely_benign 0.3121 benign -0.141 Destabilizing 0.926 D 0.605 neutral None None None None N
R/C 0.1 likely_benign 0.0992 benign -0.271 Destabilizing 1.0 D 0.613 neutral N 0.43742205 None None N
R/D 0.5814 likely_pathogenic 0.5161 ambiguous -0.037 Destabilizing 0.995 D 0.614 neutral None None None None N
R/E 0.3291 likely_benign 0.3194 benign 0.064 Stabilizing 0.968 D 0.631 neutral None None None None N
R/F 0.279 likely_benign 0.2961 benign -0.178 Destabilizing 0.998 D 0.632 neutral None None None None N
R/G 0.3119 likely_benign 0.249 benign -0.394 Destabilizing 0.992 D 0.611 neutral N 0.455962868 None None N
R/H 0.0576 likely_benign 0.0617 benign -0.875 Destabilizing 1.0 D 0.644 neutral N 0.45518166 None None N
R/I 0.1442 likely_benign 0.1597 benign 0.508 Stabilizing 0.991 D 0.653 prob.neutral None None None None N
R/K 0.1122 likely_benign 0.1319 benign -0.195 Destabilizing 0.29 N 0.379 neutral None None None None N
R/L 0.1573 likely_benign 0.1482 benign 0.508 Stabilizing 0.983 D 0.603 neutral N 0.413831451 None None N
R/M 0.2557 likely_benign 0.2765 benign -0.008 Destabilizing 1.0 D 0.613 neutral None None None None N
R/N 0.3787 ambiguous 0.3521 ambiguous 0.043 Stabilizing 0.984 D 0.639 neutral None None None None N
R/P 0.9012 likely_pathogenic 0.8227 pathogenic 0.313 Stabilizing 0.999 D 0.665 prob.neutral N 0.497001032 None None N
R/Q 0.0984 likely_benign 0.1001 benign -0.024 Destabilizing 0.991 D 0.664 prob.neutral None None None None N
R/S 0.314 likely_benign 0.2934 benign -0.401 Destabilizing 0.967 D 0.593 neutral N 0.433877692 None None N
R/T 0.153 likely_benign 0.1662 benign -0.139 Destabilizing 0.29 N 0.479 neutral None None None None N
R/V 0.1904 likely_benign 0.2214 benign 0.313 Stabilizing 0.991 D 0.601 neutral None None None None N
R/W 0.1227 likely_benign 0.1188 benign -0.126 Destabilizing 1.0 D 0.635 neutral None None None None N
R/Y 0.1928 likely_benign 0.1926 benign 0.253 Stabilizing 0.998 D 0.649 prob.neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.