Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14697 | 44314;44315;44316 | chr2:178630869;178630868;178630867 | chr2:179495596;179495595;179495594 |
N2AB | 13056 | 39391;39392;39393 | chr2:178630869;178630868;178630867 | chr2:179495596;179495595;179495594 |
N2A | 12129 | 36610;36611;36612 | chr2:178630869;178630868;178630867 | chr2:179495596;179495595;179495594 |
N2B | 5632 | 17119;17120;17121 | chr2:178630869;178630868;178630867 | chr2:179495596;179495595;179495594 |
Novex-1 | 5757 | 17494;17495;17496 | chr2:178630869;178630868;178630867 | chr2:179495596;179495595;179495594 |
Novex-2 | 5824 | 17695;17696;17697 | chr2:178630869;178630868;178630867 | chr2:179495596;179495595;179495594 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1356852922 | -1.113 | 1.0 | D | 0.669 | 0.375 | 0.248417906384 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 7.81E-06 | 0 |
E/K | rs1356852922 | -1.113 | 1.0 | D | 0.669 | 0.375 | 0.248417906384 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1356852922 | -1.113 | 1.0 | D | 0.669 | 0.375 | 0.248417906384 | gnomAD-4.0.0 | 1.41008E-05 | None | None | None | None | N | None | 8.46167E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18343E-06 | 4.02134E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3635 | ambiguous | 0.294 | benign | -1.237 | Destabilizing | 0.997 | D | 0.759 | deleterious | D | 0.564367487 | None | None | N |
E/C | 0.9682 | likely_pathogenic | 0.9531 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
E/D | 0.7113 | likely_pathogenic | 0.6651 | pathogenic | -1.536 | Destabilizing | 0.997 | D | 0.652 | prob.neutral | N | 0.495161821 | None | None | N |
E/F | 0.9455 | likely_pathogenic | 0.9269 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
E/G | 0.6532 | likely_pathogenic | 0.5362 | ambiguous | -1.621 | Destabilizing | 0.999 | D | 0.781 | deleterious | D | 0.605096943 | None | None | N |
E/H | 0.8849 | likely_pathogenic | 0.8362 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/I | 0.606 | likely_pathogenic | 0.5478 | ambiguous | -0.164 | Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
E/K | 0.4733 | ambiguous | 0.3517 | ambiguous | -1.302 | Destabilizing | 1.0 | D | 0.669 | prob.neutral | D | 0.563148404 | None | None | N |
E/L | 0.7983 | likely_pathogenic | 0.735 | pathogenic | -0.164 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
E/M | 0.7054 | likely_pathogenic | 0.6332 | pathogenic | 0.397 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
E/N | 0.798 | likely_pathogenic | 0.7355 | pathogenic | -1.573 | Destabilizing | 0.999 | D | 0.725 | deleterious | None | None | None | None | N |
E/P | 0.9968 | likely_pathogenic | 0.9937 | pathogenic | -0.503 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
E/Q | 0.2712 | likely_benign | 0.2278 | benign | -1.415 | Destabilizing | 1.0 | D | 0.641 | neutral | D | 0.525436174 | None | None | N |
E/R | 0.6721 | likely_pathogenic | 0.5574 | ambiguous | -1.055 | Destabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | N |
E/S | 0.5338 | ambiguous | 0.4632 | ambiguous | -2.092 | Highly Destabilizing | 0.998 | D | 0.655 | prob.neutral | None | None | None | None | N |
E/T | 0.5189 | ambiguous | 0.4402 | ambiguous | -1.761 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
E/V | 0.3706 | ambiguous | 0.3211 | benign | -0.503 | Destabilizing | 0.999 | D | 0.838 | deleterious | D | 0.600667521 | None | None | N |
E/W | 0.9883 | likely_pathogenic | 0.9829 | pathogenic | -0.756 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/Y | 0.9362 | likely_pathogenic | 0.9116 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.