Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14699 | 44320;44321;44322 | chr2:178630863;178630862;178630861 | chr2:179495590;179495589;179495588 |
N2AB | 13058 | 39397;39398;39399 | chr2:178630863;178630862;178630861 | chr2:179495590;179495589;179495588 |
N2A | 12131 | 36616;36617;36618 | chr2:178630863;178630862;178630861 | chr2:179495590;179495589;179495588 |
N2B | 5634 | 17125;17126;17127 | chr2:178630863;178630862;178630861 | chr2:179495590;179495589;179495588 |
Novex-1 | 5759 | 17500;17501;17502 | chr2:178630863;178630862;178630861 | chr2:179495590;179495589;179495588 |
Novex-2 | 5826 | 17701;17702;17703 | chr2:178630863;178630862;178630861 | chr2:179495590;179495589;179495588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1293270234 | -0.246 | 1.0 | D | 0.677 | 0.465 | 0.340032825777 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 1.65893E-04 |
S/C | rs1293270234 | -0.246 | 1.0 | D | 0.677 | 0.465 | 0.340032825777 | gnomAD-4.0.0 | 4.77686E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58099E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4929 | ambiguous | 0.4711 | ambiguous | -0.375 | Destabilizing | 0.994 | D | 0.343 | neutral | D | 0.609077008 | None | None | N |
S/C | 0.7476 | likely_pathogenic | 0.7453 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.613178089 | None | None | N |
S/D | 0.8788 | likely_pathogenic | 0.8716 | pathogenic | 0.028 | Stabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | N |
S/E | 0.9737 | likely_pathogenic | 0.9677 | pathogenic | 0.027 | Stabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
S/F | 0.9585 | likely_pathogenic | 0.9417 | pathogenic | -0.531 | Destabilizing | 0.999 | D | 0.766 | deleterious | D | 0.611509329 | None | None | N |
S/G | 0.5118 | ambiguous | 0.492 | ambiguous | -0.625 | Destabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | N |
S/H | 0.9624 | likely_pathogenic | 0.9566 | pathogenic | -1.052 | Destabilizing | 1.0 | D | 0.671 | prob.neutral | None | None | None | None | N |
S/I | 0.8913 | likely_pathogenic | 0.8612 | pathogenic | 0.173 | Stabilizing | 0.999 | D | 0.695 | prob.delet. | None | None | None | None | N |
S/K | 0.9962 | likely_pathogenic | 0.9949 | pathogenic | -0.618 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
S/L | 0.6775 | likely_pathogenic | 0.6095 | pathogenic | 0.173 | Stabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
S/M | 0.8452 | likely_pathogenic | 0.8036 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/N | 0.5984 | likely_pathogenic | 0.6148 | pathogenic | -0.58 | Destabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | N |
S/P | 0.983 | likely_pathogenic | 0.973 | pathogenic | 0.026 | Stabilizing | 0.999 | D | 0.646 | neutral | D | 0.612432716 | None | None | N |
S/Q | 0.9773 | likely_pathogenic | 0.9747 | pathogenic | -0.641 | Destabilizing | 0.999 | D | 0.668 | prob.neutral | None | None | None | None | N |
S/R | 0.993 | likely_pathogenic | 0.9906 | pathogenic | -0.54 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
S/T | 0.2155 | likely_benign | 0.1936 | benign | -0.56 | Destabilizing | 0.997 | D | 0.409 | neutral | D | 0.568720859 | None | None | N |
S/V | 0.8928 | likely_pathogenic | 0.8707 | pathogenic | 0.026 | Stabilizing | 0.999 | D | 0.728 | deleterious | None | None | None | None | N |
S/W | 0.969 | likely_pathogenic | 0.9578 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
S/Y | 0.9303 | likely_pathogenic | 0.9063 | pathogenic | -0.298 | Destabilizing | 0.999 | D | 0.768 | deleterious | D | 0.611509329 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.