Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14700 | 44323;44324;44325 | chr2:178630860;178630859;178630858 | chr2:179495587;179495586;179495585 |
N2AB | 13059 | 39400;39401;39402 | chr2:178630860;178630859;178630858 | chr2:179495587;179495586;179495585 |
N2A | 12132 | 36619;36620;36621 | chr2:178630860;178630859;178630858 | chr2:179495587;179495586;179495585 |
N2B | 5635 | 17128;17129;17130 | chr2:178630860;178630859;178630858 | chr2:179495587;179495586;179495585 |
Novex-1 | 5760 | 17503;17504;17505 | chr2:178630860;178630859;178630858 | chr2:179495587;179495586;179495585 |
Novex-2 | 5827 | 17704;17705;17706 | chr2:178630860;178630859;178630858 | chr2:179495587;179495586;179495585 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.007 | N | 0.231 | 0.058 | 0.19670166235 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41779E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3379 | likely_benign | 0.3076 | benign | -0.697 | Destabilizing | 0.7 | D | 0.663 | prob.neutral | N | 0.460008492 | None | None | N |
E/C | 0.9367 | likely_pathogenic | 0.9367 | pathogenic | -0.321 | Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
E/D | 0.3855 | ambiguous | 0.4986 | ambiguous | -0.864 | Destabilizing | 0.007 | N | 0.231 | neutral | N | 0.479247787 | None | None | N |
E/F | 0.9152 | likely_pathogenic | 0.9286 | pathogenic | -0.22 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
E/G | 0.4155 | ambiguous | 0.4474 | ambiguous | -1.022 | Destabilizing | 0.891 | D | 0.612 | neutral | N | 0.514892434 | None | None | N |
E/H | 0.7007 | likely_pathogenic | 0.7198 | pathogenic | -0.345 | Destabilizing | 0.996 | D | 0.727 | deleterious | None | None | None | None | N |
E/I | 0.7242 | likely_pathogenic | 0.771 | pathogenic | 0.173 | Stabilizing | 0.956 | D | 0.806 | deleterious | None | None | None | None | N |
E/K | 0.2783 | likely_benign | 0.2906 | benign | -0.278 | Destabilizing | 0.7 | D | 0.595 | neutral | N | 0.504351693 | None | None | N |
E/L | 0.7673 | likely_pathogenic | 0.8025 | pathogenic | 0.173 | Stabilizing | 0.956 | D | 0.726 | deleterious | None | None | None | None | N |
E/M | 0.7556 | likely_pathogenic | 0.7659 | pathogenic | 0.468 | Stabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | N |
E/N | 0.66 | likely_pathogenic | 0.7002 | pathogenic | -0.778 | Destabilizing | 0.844 | D | 0.756 | deleterious | None | None | None | None | N |
E/P | 0.9682 | likely_pathogenic | 0.9837 | pathogenic | -0.095 | Destabilizing | 0.956 | D | 0.756 | deleterious | None | None | None | None | N |
E/Q | 0.281 | likely_benign | 0.2986 | benign | -0.654 | Destabilizing | 0.891 | D | 0.722 | deleterious | N | 0.413856604 | None | None | N |
E/R | 0.4453 | ambiguous | 0.469 | ambiguous | -0.002 | Destabilizing | 0.956 | D | 0.735 | deleterious | None | None | None | None | N |
E/S | 0.4853 | ambiguous | 0.496 | ambiguous | -1.002 | Destabilizing | 0.607 | D | 0.621 | neutral | None | None | None | None | N |
E/T | 0.5353 | ambiguous | 0.5597 | ambiguous | -0.732 | Destabilizing | 0.916 | D | 0.72 | deleterious | None | None | None | None | N |
E/V | 0.4703 | ambiguous | 0.5009 | ambiguous | -0.095 | Destabilizing | 0.943 | D | 0.706 | prob.delet. | N | 0.507935314 | None | None | N |
E/W | 0.9673 | likely_pathogenic | 0.9772 | pathogenic | 0.024 | Stabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
E/Y | 0.8645 | likely_pathogenic | 0.893 | pathogenic | 0.033 | Stabilizing | 0.996 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.