Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14706 | 44341;44342;44343 | chr2:178630842;178630841;178630840 | chr2:179495569;179495568;179495567 |
N2AB | 13065 | 39418;39419;39420 | chr2:178630842;178630841;178630840 | chr2:179495569;179495568;179495567 |
N2A | 12138 | 36637;36638;36639 | chr2:178630842;178630841;178630840 | chr2:179495569;179495568;179495567 |
N2B | 5641 | 17146;17147;17148 | chr2:178630842;178630841;178630840 | chr2:179495569;179495568;179495567 |
Novex-1 | 5766 | 17521;17522;17523 | chr2:178630842;178630841;178630840 | chr2:179495569;179495568;179495567 |
Novex-2 | 5833 | 17722;17723;17724 | chr2:178630842;178630841;178630840 | chr2:179495569;179495568;179495567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs878854309 | -0.608 | 0.001 | N | 0.202 | 0.086 | 0.0551355673512 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14705E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2065 | likely_benign | 0.192 | benign | -0.759 | Destabilizing | 0.002 | N | 0.367 | neutral | None | None | None | None | N |
N/C | 0.2586 | likely_benign | 0.2547 | benign | 0.098 | Stabilizing | 0.878 | D | 0.461 | neutral | None | None | None | None | N |
N/D | 0.1862 | likely_benign | 0.198 | benign | -0.081 | Destabilizing | 0.094 | N | 0.393 | neutral | N | 0.434971343 | None | None | N |
N/E | 0.4142 | ambiguous | 0.4237 | ambiguous | -0.015 | Destabilizing | 0.064 | N | 0.375 | neutral | None | None | None | None | N |
N/F | 0.4375 | ambiguous | 0.4388 | ambiguous | -0.693 | Destabilizing | 0.538 | D | 0.586 | neutral | None | None | None | None | N |
N/G | 0.3255 | likely_benign | 0.3129 | benign | -1.05 | Destabilizing | 0.064 | N | 0.317 | neutral | None | None | None | None | N |
N/H | 0.1001 | likely_benign | 0.0981 | benign | -0.82 | Destabilizing | 0.002 | N | 0.253 | neutral | N | 0.409485672 | None | None | N |
N/I | 0.1395 | likely_benign | 0.1305 | benign | -0.038 | Destabilizing | None | N | 0.405 | neutral | N | 0.405579298 | None | None | N |
N/K | 0.296 | likely_benign | 0.3074 | benign | -0.193 | Destabilizing | 0.049 | N | 0.392 | neutral | N | 0.425702127 | None | None | N |
N/L | 0.196 | likely_benign | 0.1931 | benign | -0.038 | Destabilizing | 0.064 | N | 0.349 | neutral | None | None | None | None | N |
N/M | 0.2854 | likely_benign | 0.2733 | benign | 0.202 | Stabilizing | 0.538 | D | 0.499 | neutral | None | None | None | None | N |
N/P | 0.7911 | likely_pathogenic | 0.8301 | pathogenic | -0.25 | Destabilizing | 0.403 | N | 0.531 | neutral | None | None | None | None | N |
N/Q | 0.3211 | likely_benign | 0.3192 | benign | -0.557 | Destabilizing | 0.013 | N | 0.281 | neutral | None | None | None | None | N |
N/R | 0.309 | likely_benign | 0.3214 | benign | -0.221 | Destabilizing | 0.25 | N | 0.407 | neutral | None | None | None | None | N |
N/S | 0.076 | likely_benign | 0.0728 | benign | -0.618 | Destabilizing | 0.001 | N | 0.202 | neutral | N | 0.397073888 | None | None | N |
N/T | 0.1008 | likely_benign | 0.089 | benign | -0.371 | Destabilizing | 0.001 | N | 0.243 | neutral | N | 0.364698575 | None | None | N |
N/V | 0.1521 | likely_benign | 0.1424 | benign | -0.25 | Destabilizing | 0.064 | N | 0.351 | neutral | None | None | None | None | N |
N/W | 0.7342 | likely_pathogenic | 0.7676 | pathogenic | -0.549 | Destabilizing | 0.964 | D | 0.503 | neutral | None | None | None | None | N |
N/Y | 0.1479 | likely_benign | 0.1591 | benign | -0.339 | Destabilizing | 0.468 | N | 0.606 | neutral | N | 0.431466875 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.