Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14709 | 44350;44351;44352 | chr2:178630833;178630832;178630831 | chr2:179495560;179495559;179495558 |
N2AB | 13068 | 39427;39428;39429 | chr2:178630833;178630832;178630831 | chr2:179495560;179495559;179495558 |
N2A | 12141 | 36646;36647;36648 | chr2:178630833;178630832;178630831 | chr2:179495560;179495559;179495558 |
N2B | 5644 | 17155;17156;17157 | chr2:178630833;178630832;178630831 | chr2:179495560;179495559;179495558 |
Novex-1 | 5769 | 17530;17531;17532 | chr2:178630833;178630832;178630831 | chr2:179495560;179495559;179495558 |
Novex-2 | 5836 | 17731;17732;17733 | chr2:178630833;178630832;178630831 | chr2:179495560;179495559;179495558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.997 | D | 0.573 | 0.301 | 0.444102476654 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9142 | likely_pathogenic | 0.9468 | pathogenic | -2.028 | Highly Destabilizing | 0.998 | D | 0.726 | deleterious | None | None | None | None | N |
L/C | 0.8905 | likely_pathogenic | 0.9278 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
L/D | 0.9879 | likely_pathogenic | 0.9919 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/E | 0.943 | likely_pathogenic | 0.9597 | pathogenic | -1.138 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
L/F | 0.3914 | ambiguous | 0.4899 | ambiguous | -1.294 | Destabilizing | 0.999 | D | 0.752 | deleterious | D | 0.542354601 | None | None | N |
L/G | 0.9656 | likely_pathogenic | 0.9766 | pathogenic | -2.429 | Highly Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
L/H | 0.7861 | likely_pathogenic | 0.8668 | pathogenic | -1.51 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.543123139 | None | None | N |
L/I | 0.1967 | likely_benign | 0.2505 | benign | -0.964 | Destabilizing | 0.997 | D | 0.573 | neutral | D | 0.581181237 | None | None | N |
L/K | 0.8283 | likely_pathogenic | 0.8804 | pathogenic | -1.411 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
L/M | 0.2622 | likely_benign | 0.34 | ambiguous | -0.862 | Destabilizing | 0.999 | D | 0.739 | deleterious | None | None | None | None | N |
L/N | 0.9355 | likely_pathogenic | 0.9615 | pathogenic | -1.31 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/P | 0.9885 | likely_pathogenic | 0.9915 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.583982092 | None | None | N |
L/Q | 0.7324 | likely_pathogenic | 0.8336 | pathogenic | -1.409 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/R | 0.7196 | likely_pathogenic | 0.7974 | pathogenic | -0.858 | Destabilizing | 0.999 | D | 0.853 | deleterious | N | 0.414454862 | None | None | N |
L/S | 0.9518 | likely_pathogenic | 0.9745 | pathogenic | -2.087 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/T | 0.9189 | likely_pathogenic | 0.9526 | pathogenic | -1.887 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
L/V | 0.2962 | likely_benign | 0.3887 | ambiguous | -1.289 | Destabilizing | 0.997 | D | 0.569 | neutral | D | 0.542354601 | None | None | N |
L/W | 0.5353 | ambiguous | 0.6658 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
L/Y | 0.6735 | likely_pathogenic | 0.7872 | pathogenic | -1.148 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.