Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14712 | 44359;44360;44361 | chr2:178630824;178630823;178630822 | chr2:179495551;179495550;179495549 |
N2AB | 13071 | 39436;39437;39438 | chr2:178630824;178630823;178630822 | chr2:179495551;179495550;179495549 |
N2A | 12144 | 36655;36656;36657 | chr2:178630824;178630823;178630822 | chr2:179495551;179495550;179495549 |
N2B | 5647 | 17164;17165;17166 | chr2:178630824;178630823;178630822 | chr2:179495551;179495550;179495549 |
Novex-1 | 5772 | 17539;17540;17541 | chr2:178630824;178630823;178630822 | chr2:179495551;179495550;179495549 |
Novex-2 | 5839 | 17740;17741;17742 | chr2:178630824;178630823;178630822 | chr2:179495551;179495550;179495549 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs377495241 | -0.255 | 0.009 | N | 0.205 | 0.083 | 0.136095386433 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/D | rs377495241 | -0.255 | 0.009 | N | 0.205 | 0.083 | 0.136095386433 | gnomAD-4.0.0 | 6.8455E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99798E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.235 | likely_benign | 0.3253 | benign | -0.296 | Destabilizing | 0.877 | D | 0.559 | neutral | N | 0.426199891 | None | None | N |
E/C | 0.8988 | likely_pathogenic | 0.9484 | pathogenic | -0.226 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
E/D | 0.1348 | likely_benign | 0.1762 | benign | -0.317 | Destabilizing | 0.009 | N | 0.205 | neutral | N | 0.437796785 | None | None | N |
E/F | 0.8047 | likely_pathogenic | 0.8838 | pathogenic | -0.11 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
E/G | 0.2857 | likely_benign | 0.416 | ambiguous | -0.485 | Destabilizing | 0.877 | D | 0.409 | neutral | N | 0.512483653 | None | None | N |
E/H | 0.5647 | likely_pathogenic | 0.7023 | pathogenic | 0.308 | Stabilizing | 0.999 | D | 0.511 | neutral | None | None | None | None | N |
E/I | 0.3887 | ambiguous | 0.5019 | ambiguous | 0.163 | Stabilizing | 0.985 | D | 0.651 | prob.neutral | None | None | None | None | N |
E/K | 0.1704 | likely_benign | 0.2259 | benign | 0.27 | Stabilizing | 0.877 | D | 0.489 | neutral | N | 0.423037592 | None | None | N |
E/L | 0.5429 | ambiguous | 0.6678 | pathogenic | 0.163 | Stabilizing | 0.985 | D | 0.657 | prob.neutral | None | None | None | None | N |
E/M | 0.5234 | ambiguous | 0.6277 | pathogenic | 0.077 | Stabilizing | 0.999 | D | 0.512 | neutral | None | None | None | None | N |
E/N | 0.2691 | likely_benign | 0.3745 | ambiguous | -0.096 | Destabilizing | 0.943 | D | 0.514 | neutral | None | None | None | None | N |
E/P | 0.9187 | likely_pathogenic | 0.9728 | pathogenic | 0.03 | Stabilizing | 0.985 | D | 0.537 | neutral | None | None | None | None | N |
E/Q | 0.18 | likely_benign | 0.2367 | benign | -0.047 | Destabilizing | 0.981 | D | 0.513 | neutral | N | 0.433204581 | None | None | N |
E/R | 0.3383 | likely_benign | 0.4557 | ambiguous | 0.572 | Stabilizing | 0.985 | D | 0.543 | neutral | None | None | None | None | N |
E/S | 0.2837 | likely_benign | 0.3828 | ambiguous | -0.254 | Destabilizing | 0.904 | D | 0.501 | neutral | None | None | None | None | N |
E/T | 0.2831 | likely_benign | 0.3828 | ambiguous | -0.095 | Destabilizing | 0.985 | D | 0.529 | neutral | None | None | None | None | N |
E/V | 0.2431 | likely_benign | 0.321 | benign | 0.03 | Stabilizing | 0.981 | D | 0.545 | neutral | N | 0.433956172 | None | None | N |
E/W | 0.9428 | likely_pathogenic | 0.9745 | pathogenic | 0.042 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
E/Y | 0.7064 | likely_pathogenic | 0.8283 | pathogenic | 0.131 | Stabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.