Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14718 | 44377;44378;44379 | chr2:178630806;178630805;178630804 | chr2:179495533;179495532;179495531 |
N2AB | 13077 | 39454;39455;39456 | chr2:178630806;178630805;178630804 | chr2:179495533;179495532;179495531 |
N2A | 12150 | 36673;36674;36675 | chr2:178630806;178630805;178630804 | chr2:179495533;179495532;179495531 |
N2B | 5653 | 17182;17183;17184 | chr2:178630806;178630805;178630804 | chr2:179495533;179495532;179495531 |
Novex-1 | 5778 | 17557;17558;17559 | chr2:178630806;178630805;178630804 | chr2:179495533;179495532;179495531 |
Novex-2 | 5845 | 17758;17759;17760 | chr2:178630806;178630805;178630804 | chr2:179495533;179495532;179495531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs761687390 | 0.097 | 0.986 | D | 0.54 | 0.403 | 0.396794106654 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
P/L | rs761687390 | 0.097 | 0.986 | D | 0.54 | 0.403 | 0.396794106654 | gnomAD-4.0.0 | 1.37036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80046E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.064 | likely_benign | 0.067 | benign | -0.195 | Destabilizing | 0.058 | N | 0.402 | neutral | N | 0.434420089 | None | None | N |
P/C | 0.5937 | likely_pathogenic | 0.6177 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
P/D | 0.3548 | ambiguous | 0.4058 | ambiguous | -0.362 | Destabilizing | 0.995 | D | 0.579 | neutral | None | None | None | None | N |
P/E | 0.2397 | likely_benign | 0.2484 | benign | -0.496 | Destabilizing | 0.989 | D | 0.591 | neutral | None | None | None | None | N |
P/F | 0.5274 | ambiguous | 0.5766 | pathogenic | -0.656 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
P/G | 0.2714 | likely_benign | 0.3362 | benign | -0.254 | Destabilizing | 0.929 | D | 0.477 | neutral | None | None | None | None | N |
P/H | 0.2089 | likely_benign | 0.2116 | benign | 0.077 | Stabilizing | 0.999 | D | 0.491 | neutral | N | 0.476713137 | None | None | N |
P/I | 0.3009 | likely_benign | 0.3375 | benign | -0.192 | Destabilizing | 0.989 | D | 0.58 | neutral | None | None | None | None | N |
P/K | 0.241 | likely_benign | 0.2777 | benign | -0.237 | Destabilizing | 0.989 | D | 0.593 | neutral | None | None | None | None | N |
P/L | 0.1368 | likely_benign | 0.1371 | benign | -0.192 | Destabilizing | 0.986 | D | 0.54 | neutral | D | 0.541003075 | None | None | N |
P/M | 0.3009 | likely_benign | 0.3297 | benign | -0.328 | Destabilizing | 1.0 | D | 0.49 | neutral | None | None | None | None | N |
P/N | 0.286 | likely_benign | 0.3422 | ambiguous | 0.043 | Stabilizing | 0.995 | D | 0.483 | neutral | None | None | None | None | N |
P/Q | 0.1521 | likely_benign | 0.1564 | benign | -0.218 | Destabilizing | 0.995 | D | 0.512 | neutral | None | None | None | None | N |
P/R | 0.1775 | likely_benign | 0.1752 | benign | 0.244 | Stabilizing | 0.993 | D | 0.455 | neutral | N | 0.498434639 | None | None | N |
P/S | 0.103 | likely_benign | 0.1107 | benign | -0.235 | Destabilizing | 0.908 | D | 0.596 | neutral | N | 0.434248303 | None | None | N |
P/T | 0.0928 | likely_benign | 0.0999 | benign | -0.281 | Destabilizing | 0.986 | D | 0.585 | neutral | D | 0.537367968 | None | None | N |
P/V | 0.1997 | likely_benign | 0.2261 | benign | -0.163 | Destabilizing | 0.979 | D | 0.459 | neutral | None | None | None | None | N |
P/W | 0.6516 | likely_pathogenic | 0.6893 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
P/Y | 0.4864 | ambiguous | 0.5393 | ambiguous | -0.422 | Destabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.