Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14724 | 44395;44396;44397 | chr2:178630352;178630351;178630350 | chr2:179495079;179495078;179495077 |
N2AB | 13083 | 39472;39473;39474 | chr2:178630352;178630351;178630350 | chr2:179495079;179495078;179495077 |
N2A | 12156 | 36691;36692;36693 | chr2:178630352;178630351;178630350 | chr2:179495079;179495078;179495077 |
N2B | 5659 | 17200;17201;17202 | chr2:178630352;178630351;178630350 | chr2:179495079;179495078;179495077 |
Novex-1 | 5784 | 17575;17576;17577 | chr2:178630352;178630351;178630350 | chr2:179495079;179495078;179495077 |
Novex-2 | 5851 | 17776;17777;17778 | chr2:178630352;178630351;178630350 | chr2:179495079;179495078;179495077 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1458591077 | 0.233 | 0.983 | N | 0.547 | 0.266 | 0.284539287134 | gnomAD-2.1.1 | 8.22E-06 | None | None | None | None | N | None | 6.49E-05 | 3E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1458591077 | 0.233 | 0.983 | N | 0.547 | 0.266 | 0.284539287134 | gnomAD-4.0.0 | 1.60181E-06 | None | None | None | None | N | None | 0 | 2.3297E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2328 | likely_benign | 0.2428 | benign | -0.484 | Destabilizing | 0.991 | D | 0.579 | neutral | N | 0.430035451 | None | None | N |
E/C | 0.9249 | likely_pathogenic | 0.9385 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/D | 0.4544 | ambiguous | 0.4685 | ambiguous | -0.965 | Destabilizing | 0.991 | D | 0.532 | neutral | N | 0.512146346 | None | None | N |
E/F | 0.9229 | likely_pathogenic | 0.9297 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.725 | deleterious | None | None | None | None | N |
E/G | 0.2591 | likely_benign | 0.2882 | benign | -0.801 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.51130285 | None | None | N |
E/H | 0.7733 | likely_pathogenic | 0.8258 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/I | 0.6199 | likely_pathogenic | 0.5784 | pathogenic | 0.361 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/K | 0.2403 | likely_benign | 0.2841 | benign | -0.81 | Destabilizing | 0.983 | D | 0.547 | neutral | N | 0.420039463 | None | None | N |
E/L | 0.7222 | likely_pathogenic | 0.7186 | pathogenic | 0.361 | Stabilizing | 0.999 | D | 0.724 | deleterious | None | None | None | None | N |
E/M | 0.6607 | likely_pathogenic | 0.6407 | pathogenic | 0.778 | Stabilizing | 1.0 | D | 0.69 | prob.delet. | None | None | None | None | N |
E/N | 0.5804 | likely_pathogenic | 0.5989 | pathogenic | -0.912 | Destabilizing | 0.999 | D | 0.706 | prob.delet. | None | None | None | None | N |
E/P | 0.8722 | likely_pathogenic | 0.9185 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
E/Q | 0.1912 | likely_benign | 0.2297 | benign | -0.769 | Destabilizing | 0.911 | D | 0.259 | neutral | N | 0.434138767 | None | None | N |
E/R | 0.3944 | ambiguous | 0.4728 | ambiguous | -0.727 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/S | 0.3855 | ambiguous | 0.4119 | ambiguous | -1.203 | Destabilizing | 0.993 | D | 0.623 | neutral | None | None | None | None | N |
E/T | 0.3642 | ambiguous | 0.3472 | ambiguous | -0.966 | Destabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | N |
E/V | 0.3542 | ambiguous | 0.3151 | benign | 0.101 | Stabilizing | 0.999 | D | 0.727 | deleterious | N | 0.433454706 | None | None | N |
E/W | 0.9658 | likely_pathogenic | 0.9753 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/Y | 0.8591 | likely_pathogenic | 0.8847 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.723 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.