Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14725 | 44398;44399;44400 | chr2:178630349;178630348;178630347 | chr2:179495076;179495075;179495074 |
N2AB | 13084 | 39475;39476;39477 | chr2:178630349;178630348;178630347 | chr2:179495076;179495075;179495074 |
N2A | 12157 | 36694;36695;36696 | chr2:178630349;178630348;178630347 | chr2:179495076;179495075;179495074 |
N2B | 5660 | 17203;17204;17205 | chr2:178630349;178630348;178630347 | chr2:179495076;179495075;179495074 |
Novex-1 | 5785 | 17578;17579;17580 | chr2:178630349;178630348;178630347 | chr2:179495076;179495075;179495074 |
Novex-2 | 5852 | 17779;17780;17781 | chr2:178630349;178630348;178630347 | chr2:179495076;179495075;179495074 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.999 | N | 0.643 | 0.394 | 0.309530620856 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1636 | likely_benign | 0.1618 | benign | -0.204 | Destabilizing | 0.996 | D | 0.685 | prob.delet. | N | 0.51589602 | None | None | N |
E/C | 0.8469 | likely_pathogenic | 0.8653 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/D | 0.1391 | likely_benign | 0.132 | benign | -0.248 | Destabilizing | 0.262 | N | 0.263 | neutral | N | 0.422485279 | None | None | N |
E/F | 0.6758 | likely_pathogenic | 0.6833 | pathogenic | -0.062 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/G | 0.1988 | likely_benign | 0.197 | benign | -0.378 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.474591958 | None | None | N |
E/H | 0.4517 | ambiguous | 0.4864 | ambiguous | 0.325 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/I | 0.2903 | likely_benign | 0.3045 | benign | 0.212 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/K | 0.1348 | likely_benign | 0.1437 | benign | 0.47 | Stabilizing | 0.996 | D | 0.622 | neutral | N | 0.431628313 | None | None | N |
E/L | 0.4579 | ambiguous | 0.462 | ambiguous | 0.212 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/M | 0.4425 | ambiguous | 0.4471 | ambiguous | 0.136 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/N | 0.2459 | likely_benign | 0.2511 | benign | 0.067 | Stabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | N |
E/P | 0.909 | likely_pathogenic | 0.9209 | pathogenic | 0.093 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
E/Q | 0.1537 | likely_benign | 0.1668 | benign | 0.118 | Stabilizing | 0.999 | D | 0.739 | deleterious | N | 0.44004705 | None | None | N |
E/R | 0.2511 | likely_benign | 0.2716 | benign | 0.684 | Stabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
E/S | 0.2176 | likely_benign | 0.218 | benign | -0.055 | Destabilizing | 0.993 | D | 0.651 | prob.neutral | None | None | None | None | N |
E/T | 0.2059 | likely_benign | 0.2094 | benign | 0.097 | Stabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
E/V | 0.1768 | likely_benign | 0.1832 | benign | 0.093 | Stabilizing | 1.0 | D | 0.736 | deleterious | N | 0.455574726 | None | None | N |
E/W | 0.8549 | likely_pathogenic | 0.8588 | pathogenic | 0.071 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/Y | 0.5752 | likely_pathogenic | 0.5969 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.