Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14729 | 44410;44411;44412 | chr2:178630337;178630336;178630335 | chr2:179495064;179495063;179495062 |
N2AB | 13088 | 39487;39488;39489 | chr2:178630337;178630336;178630335 | chr2:179495064;179495063;179495062 |
N2A | 12161 | 36706;36707;36708 | chr2:178630337;178630336;178630335 | chr2:179495064;179495063;179495062 |
N2B | 5664 | 17215;17216;17217 | chr2:178630337;178630336;178630335 | chr2:179495064;179495063;179495062 |
Novex-1 | 5789 | 17590;17591;17592 | chr2:178630337;178630336;178630335 | chr2:179495064;179495063;179495062 |
Novex-2 | 5856 | 17791;17792;17793 | chr2:178630337;178630336;178630335 | chr2:179495064;179495063;179495062 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs774485726 | -0.913 | 0.999 | N | 0.765 | 0.458 | 0.311079019809 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
H/R | rs774485726 | -0.913 | 0.999 | N | 0.765 | 0.458 | 0.311079019809 | gnomAD-4.0.0 | 1.37065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80009E-06 | 0 | 0 |
H/Y | None | None | 0.997 | N | 0.584 | 0.444 | 0.299770980665 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9413 | likely_pathogenic | 0.9498 | pathogenic | -1.943 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | N |
H/C | 0.4809 | ambiguous | 0.5532 | ambiguous | -1.276 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
H/D | 0.9718 | likely_pathogenic | 0.9755 | pathogenic | -1.864 | Destabilizing | 0.999 | D | 0.791 | deleterious | D | 0.6065461 | None | None | N |
H/E | 0.9769 | likely_pathogenic | 0.9783 | pathogenic | -1.641 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
H/F | 0.6509 | likely_pathogenic | 0.7014 | pathogenic | 0.026 | Stabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
H/G | 0.9653 | likely_pathogenic | 0.9695 | pathogenic | -2.38 | Highly Destabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | N |
H/I | 0.8694 | likely_pathogenic | 0.8838 | pathogenic | -0.629 | Destabilizing | 0.999 | D | 0.907 | deleterious | None | None | None | None | N |
H/K | 0.8791 | likely_pathogenic | 0.9139 | pathogenic | -1.068 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
H/L | 0.5333 | ambiguous | 0.583 | pathogenic | -0.629 | Destabilizing | 0.999 | D | 0.885 | deleterious | D | 0.56116367 | None | None | N |
H/M | 0.9373 | likely_pathogenic | 0.9445 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
H/N | 0.6808 | likely_pathogenic | 0.7192 | pathogenic | -1.926 | Destabilizing | 0.997 | D | 0.547 | neutral | D | 0.6065461 | None | None | N |
H/P | 0.9463 | likely_pathogenic | 0.9494 | pathogenic | -1.06 | Destabilizing | 0.999 | D | 0.889 | deleterious | D | 0.6065461 | None | None | N |
H/Q | 0.8387 | likely_pathogenic | 0.8514 | pathogenic | -1.493 | Destabilizing | 0.999 | D | 0.818 | deleterious | D | 0.604826485 | None | None | N |
H/R | 0.5138 | ambiguous | 0.6113 | pathogenic | -1.139 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.486588015 | None | None | N |
H/S | 0.894 | likely_pathogenic | 0.8975 | pathogenic | -2.156 | Highly Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
H/T | 0.9497 | likely_pathogenic | 0.9546 | pathogenic | -1.803 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
H/V | 0.8458 | likely_pathogenic | 0.8763 | pathogenic | -1.06 | Destabilizing | 0.999 | D | 0.906 | deleterious | None | None | None | None | N |
H/W | 0.7625 | likely_pathogenic | 0.7967 | pathogenic | 0.7 | Stabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
H/Y | 0.2428 | likely_benign | 0.3196 | benign | 0.447 | Stabilizing | 0.997 | D | 0.584 | neutral | N | 0.513363785 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.