Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1473 | 4642;4643;4644 | chr2:178777767;178777766;178777765 | chr2:179642494;179642493;179642492 |
N2AB | 1473 | 4642;4643;4644 | chr2:178777767;178777766;178777765 | chr2:179642494;179642493;179642492 |
N2A | 1473 | 4642;4643;4644 | chr2:178777767;178777766;178777765 | chr2:179642494;179642493;179642492 |
N2B | 1427 | 4504;4505;4506 | chr2:178777767;178777766;178777765 | chr2:179642494;179642493;179642492 |
Novex-1 | 1427 | 4504;4505;4506 | chr2:178777767;178777766;178777765 | chr2:179642494;179642493;179642492 |
Novex-2 | 1427 | 4504;4505;4506 | chr2:178777767;178777766;178777765 | chr2:179642494;179642493;179642492 |
Novex-3 | 1473 | 4642;4643;4644 | chr2:178777767;178777766;178777765 | chr2:179642494;179642493;179642492 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.999 | N | 0.534 | 0.211 | 0.180583059064 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3622 | ambiguous | 0.3637 | ambiguous | -0.65 | Destabilizing | 0.999 | D | 0.533 | neutral | N | 0.508308856 | None | None | I |
T/C | 0.9334 | likely_pathogenic | 0.9306 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
T/D | 0.9577 | likely_pathogenic | 0.9603 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
T/E | 0.9145 | likely_pathogenic | 0.9196 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
T/F | 0.8955 | likely_pathogenic | 0.9047 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
T/G | 0.8539 | likely_pathogenic | 0.8581 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
T/H | 0.8996 | likely_pathogenic | 0.9045 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
T/I | 0.6976 | likely_pathogenic | 0.7157 | pathogenic | -0.111 | Destabilizing | 1.0 | D | 0.776 | deleterious | D | 0.597108609 | None | None | I |
T/K | 0.8661 | likely_pathogenic | 0.8798 | pathogenic | -0.589 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
T/L | 0.4931 | ambiguous | 0.5046 | ambiguous | -0.111 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | I |
T/M | 0.2917 | likely_benign | 0.3068 | benign | 0.011 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
T/N | 0.6503 | likely_pathogenic | 0.6605 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.509703734 | None | None | I |
T/P | 0.4258 | ambiguous | 0.4203 | ambiguous | -0.258 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.502329142 | None | None | I |
T/Q | 0.8448 | likely_pathogenic | 0.8523 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
T/R | 0.8556 | likely_pathogenic | 0.8717 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
T/S | 0.5463 | ambiguous | 0.5449 | ambiguous | -0.79 | Destabilizing | 0.999 | D | 0.534 | neutral | N | 0.503658847 | None | None | I |
T/V | 0.5135 | ambiguous | 0.5184 | ambiguous | -0.258 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
T/W | 0.9737 | likely_pathogenic | 0.9756 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
T/Y | 0.9035 | likely_pathogenic | 0.9134 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.