Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14731 | 44416;44417;44418 | chr2:178630331;178630330;178630329 | chr2:179495058;179495057;179495056 |
N2AB | 13090 | 39493;39494;39495 | chr2:178630331;178630330;178630329 | chr2:179495058;179495057;179495056 |
N2A | 12163 | 36712;36713;36714 | chr2:178630331;178630330;178630329 | chr2:179495058;179495057;179495056 |
N2B | 5666 | 17221;17222;17223 | chr2:178630331;178630330;178630329 | chr2:179495058;179495057;179495056 |
Novex-1 | 5791 | 17596;17597;17598 | chr2:178630331;178630330;178630329 | chr2:179495058;179495057;179495056 |
Novex-2 | 5858 | 17797;17798;17799 | chr2:178630331;178630330;178630329 | chr2:179495058;179495057;179495056 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs771361227 | -1.643 | 0.999 | D | 0.82 | 0.593 | 0.785219713586 | gnomAD-2.1.1 | 1.13242E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.30356E-04 | None | 0 | 0 | 0 |
L/F | rs771361227 | -1.643 | 0.999 | D | 0.82 | 0.593 | 0.785219713586 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 1.45228E-03 | 0 |
L/F | rs771361227 | -1.643 | 0.999 | D | 0.82 | 0.593 | 0.785219713586 | gnomAD-4.0.0 | 6.45231E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.48031E-07 | 1.09363E-03 | 6.4119E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9331 | likely_pathogenic | 0.9004 | pathogenic | -2.498 | Highly Destabilizing | 0.998 | D | 0.731 | deleterious | None | None | None | None | N |
L/C | 0.9022 | likely_pathogenic | 0.901 | pathogenic | -1.704 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.243 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/E | 0.9979 | likely_pathogenic | 0.9971 | pathogenic | -2.932 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
L/F | 0.7995 | likely_pathogenic | 0.7713 | pathogenic | -1.563 | Destabilizing | 0.999 | D | 0.82 | deleterious | D | 0.713871158 | None | None | N |
L/G | 0.992 | likely_pathogenic | 0.9897 | pathogenic | -3.097 | Highly Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
L/H | 0.9933 | likely_pathogenic | 0.9918 | pathogenic | -2.782 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.717633638 | None | None | N |
L/I | 0.3271 | likely_benign | 0.2603 | benign | -0.713 | Destabilizing | 0.997 | D | 0.58 | neutral | D | 0.711943723 | None | None | N |
L/K | 0.9946 | likely_pathogenic | 0.9936 | pathogenic | -2.017 | Highly Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
L/M | 0.4976 | ambiguous | 0.4473 | ambiguous | -0.725 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
L/N | 0.9979 | likely_pathogenic | 0.9976 | pathogenic | -2.691 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/P | 0.998 | likely_pathogenic | 0.9974 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.717633638 | None | None | N |
L/Q | 0.9898 | likely_pathogenic | 0.9866 | pathogenic | -2.369 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/R | 0.9844 | likely_pathogenic | 0.9806 | pathogenic | -2.044 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | D | 0.717633638 | None | None | N |
L/S | 0.9954 | likely_pathogenic | 0.9924 | pathogenic | -3.274 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
L/T | 0.9782 | likely_pathogenic | 0.9619 | pathogenic | -2.795 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
L/V | 0.3325 | likely_benign | 0.2287 | benign | -1.296 | Destabilizing | 0.997 | D | 0.582 | neutral | D | 0.714614901 | None | None | N |
L/W | 0.9848 | likely_pathogenic | 0.9814 | pathogenic | -2.01 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/Y | 0.9865 | likely_pathogenic | 0.9867 | pathogenic | -1.698 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.