Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14738 | 44437;44438;44439 | chr2:178630310;178630309;178630308 | chr2:179495037;179495036;179495035 |
N2AB | 13097 | 39514;39515;39516 | chr2:178630310;178630309;178630308 | chr2:179495037;179495036;179495035 |
N2A | 12170 | 36733;36734;36735 | chr2:178630310;178630309;178630308 | chr2:179495037;179495036;179495035 |
N2B | 5673 | 17242;17243;17244 | chr2:178630310;178630309;178630308 | chr2:179495037;179495036;179495035 |
Novex-1 | 5798 | 17617;17618;17619 | chr2:178630310;178630309;178630308 | chr2:179495037;179495036;179495035 |
Novex-2 | 5865 | 17818;17819;17820 | chr2:178630310;178630309;178630308 | chr2:179495037;179495036;179495035 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs2154219916 | None | 0.067 | N | 0.229 | 0.047 | 0.233150807113 | gnomAD-4.0.0 | 6.84516E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99735E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3508 | ambiguous | 0.4428 | ambiguous | -1.42 | Destabilizing | 0.745 | D | 0.272 | neutral | None | None | None | None | N |
L/C | 0.7036 | likely_pathogenic | 0.7692 | pathogenic | -0.778 | Destabilizing | 0.998 | D | 0.311 | neutral | None | None | None | None | N |
L/D | 0.8236 | likely_pathogenic | 0.8572 | pathogenic | -0.975 | Destabilizing | 0.981 | D | 0.528 | neutral | None | None | None | None | N |
L/E | 0.4668 | ambiguous | 0.5185 | ambiguous | -1.034 | Destabilizing | 0.876 | D | 0.425 | neutral | None | None | None | None | N |
L/F | 0.2814 | likely_benign | 0.3114 | benign | -1.168 | Destabilizing | 0.961 | D | 0.355 | neutral | None | None | None | None | N |
L/G | 0.6498 | likely_pathogenic | 0.7251 | pathogenic | -1.672 | Destabilizing | 0.935 | D | 0.463 | neutral | None | None | None | None | N |
L/H | 0.3785 | ambiguous | 0.4361 | ambiguous | -0.865 | Destabilizing | 0.998 | D | 0.407 | neutral | None | None | None | None | N |
L/I | 0.1335 | likely_benign | 0.1572 | benign | -0.833 | Destabilizing | 0.78 | D | 0.316 | neutral | None | None | None | None | N |
L/K | 0.3171 | likely_benign | 0.3738 | ambiguous | -0.966 | Destabilizing | 0.087 | N | 0.189 | neutral | None | None | None | None | N |
L/M | 0.1346 | likely_benign | 0.1519 | benign | -0.568 | Destabilizing | 0.325 | N | 0.251 | neutral | N | 0.438912078 | None | None | N |
L/N | 0.5632 | ambiguous | 0.6408 | pathogenic | -0.683 | Destabilizing | 0.981 | D | 0.529 | neutral | None | None | None | None | N |
L/P | 0.2705 | likely_benign | 0.3598 | ambiguous | -0.997 | Destabilizing | 0.991 | D | 0.535 | neutral | N | 0.436910263 | None | None | N |
L/Q | 0.2059 | likely_benign | 0.2561 | benign | -0.951 | Destabilizing | 0.949 | D | 0.421 | neutral | N | 0.420371489 | None | None | N |
L/R | 0.2484 | likely_benign | 0.2877 | benign | -0.265 | Destabilizing | 0.142 | N | 0.187 | neutral | N | 0.43516344 | None | None | N |
L/S | 0.4353 | ambiguous | 0.5399 | ambiguous | -1.196 | Destabilizing | 0.876 | D | 0.369 | neutral | None | None | None | None | N |
L/T | 0.3292 | likely_benign | 0.4016 | ambiguous | -1.149 | Destabilizing | 0.876 | D | 0.339 | neutral | None | None | None | None | N |
L/V | 0.1435 | likely_benign | 0.1759 | benign | -0.997 | Destabilizing | 0.067 | N | 0.229 | neutral | N | 0.437293845 | None | None | N |
L/W | 0.3503 | ambiguous | 0.3502 | ambiguous | -1.174 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
L/Y | 0.5403 | ambiguous | 0.5886 | pathogenic | -0.976 | Destabilizing | 0.994 | D | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.