Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14743 | 44452;44453;44454 | chr2:178630295;178630294;178630293 | chr2:179495022;179495021;179495020 |
N2AB | 13102 | 39529;39530;39531 | chr2:178630295;178630294;178630293 | chr2:179495022;179495021;179495020 |
N2A | 12175 | 36748;36749;36750 | chr2:178630295;178630294;178630293 | chr2:179495022;179495021;179495020 |
N2B | 5678 | 17257;17258;17259 | chr2:178630295;178630294;178630293 | chr2:179495022;179495021;179495020 |
Novex-1 | 5803 | 17632;17633;17634 | chr2:178630295;178630294;178630293 | chr2:179495022;179495021;179495020 |
Novex-2 | 5870 | 17833;17834;17835 | chr2:178630295;178630294;178630293 | chr2:179495022;179495021;179495020 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs753855392 | -1.047 | 0.002 | N | 0.405 | 0.285 | 0.112648838833 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0944 | likely_benign | 0.1408 | benign | -0.762 | Destabilizing | 0.008 | N | 0.233 | neutral | N | 0.388463802 | None | None | N |
G/C | 0.1899 | likely_benign | 0.309 | benign | -1.035 | Destabilizing | 0.984 | D | 0.714 | prob.delet. | None | None | None | None | N |
G/D | 0.2888 | likely_benign | 0.4901 | ambiguous | -1.341 | Destabilizing | 0.272 | N | 0.553 | neutral | None | None | None | None | N |
G/E | 0.216 | likely_benign | 0.4034 | ambiguous | -1.415 | Destabilizing | 0.002 | N | 0.405 | neutral | N | 0.332261029 | None | None | N |
G/F | 0.4688 | ambiguous | 0.6104 | pathogenic | -1.181 | Destabilizing | 0.724 | D | 0.723 | deleterious | None | None | None | None | N |
G/H | 0.388 | ambiguous | 0.5835 | pathogenic | -1.369 | Destabilizing | 0.953 | D | 0.637 | neutral | None | None | None | None | N |
G/I | 0.1528 | likely_benign | 0.2626 | benign | -0.427 | Destabilizing | 0.311 | N | 0.715 | prob.delet. | None | None | None | None | N |
G/K | 0.4083 | ambiguous | 0.6492 | pathogenic | -1.321 | Destabilizing | 0.272 | N | 0.629 | neutral | None | None | None | None | N |
G/L | 0.3065 | likely_benign | 0.4852 | ambiguous | -0.427 | Destabilizing | 0.272 | N | 0.664 | prob.neutral | None | None | None | None | N |
G/M | 0.2949 | likely_benign | 0.4389 | ambiguous | -0.32 | Destabilizing | 0.908 | D | 0.7 | prob.delet. | None | None | None | None | N |
G/N | 0.2695 | likely_benign | 0.4228 | ambiguous | -0.983 | Destabilizing | 0.724 | D | 0.524 | neutral | None | None | None | None | N |
G/P | 0.6729 | likely_pathogenic | 0.7771 | pathogenic | -0.498 | Destabilizing | 0.842 | D | 0.677 | prob.neutral | None | None | None | None | N |
G/Q | 0.3119 | likely_benign | 0.4898 | ambiguous | -1.201 | Destabilizing | 0.568 | D | 0.67 | prob.neutral | None | None | None | None | N |
G/R | 0.2798 | likely_benign | 0.4904 | ambiguous | -0.967 | Destabilizing | 0.664 | D | 0.666 | prob.neutral | N | 0.432276133 | None | None | N |
G/S | 0.0904 | likely_benign | 0.129 | benign | -1.222 | Destabilizing | 0.028 | N | 0.304 | neutral | None | None | None | None | N |
G/T | 0.1131 | likely_benign | 0.1765 | benign | -1.22 | Destabilizing | 0.428 | N | 0.61 | neutral | None | None | None | None | N |
G/V | 0.1131 | likely_benign | 0.1943 | benign | -0.498 | Destabilizing | 0.004 | N | 0.483 | neutral | N | 0.429518699 | None | None | N |
G/W | 0.3539 | ambiguous | 0.4986 | ambiguous | -1.51 | Destabilizing | 0.979 | D | 0.699 | prob.delet. | N | 0.433950163 | None | None | N |
G/Y | 0.3897 | ambiguous | 0.5543 | ambiguous | -1.115 | Destabilizing | 0.842 | D | 0.725 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.