Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14744 | 44455;44456;44457 | chr2:178630292;178630291;178630290 | chr2:179495019;179495018;179495017 |
N2AB | 13103 | 39532;39533;39534 | chr2:178630292;178630291;178630290 | chr2:179495019;179495018;179495017 |
N2A | 12176 | 36751;36752;36753 | chr2:178630292;178630291;178630290 | chr2:179495019;179495018;179495017 |
N2B | 5679 | 17260;17261;17262 | chr2:178630292;178630291;178630290 | chr2:179495019;179495018;179495017 |
Novex-1 | 5804 | 17635;17636;17637 | chr2:178630292;178630291;178630290 | chr2:179495019;179495018;179495017 |
Novex-2 | 5871 | 17836;17837;17838 | chr2:178630292;178630291;178630290 | chr2:179495019;179495018;179495017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1465329711 | None | 0.961 | D | 0.674 | 0.274 | 0.341226946553 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs1465329711 | None | 0.961 | D | 0.674 | 0.274 | 0.341226946553 | gnomAD-4.0.0 | 2.47987E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39142E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8358 | likely_pathogenic | 0.8641 | pathogenic | -2.012 | Highly Destabilizing | 0.877 | D | 0.674 | prob.neutral | D | 0.583414653 | None | None | N |
V/C | 0.972 | likely_pathogenic | 0.9756 | pathogenic | -1.886 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/D | 0.9975 | likely_pathogenic | 0.9984 | pathogenic | -2.351 | Highly Destabilizing | 0.995 | D | 0.891 | deleterious | None | None | None | None | N |
V/E | 0.9923 | likely_pathogenic | 0.9942 | pathogenic | -2.067 | Highly Destabilizing | 0.994 | D | 0.882 | deleterious | D | 0.583414653 | None | None | N |
V/F | 0.6607 | likely_pathogenic | 0.7053 | pathogenic | -1.191 | Destabilizing | 0.971 | D | 0.759 | deleterious | None | None | None | None | N |
V/G | 0.9281 | likely_pathogenic | 0.9355 | pathogenic | -2.627 | Highly Destabilizing | 0.994 | D | 0.903 | deleterious | D | 0.583414653 | None | None | N |
V/H | 0.9979 | likely_pathogenic | 0.9983 | pathogenic | -2.45 | Highly Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
V/I | 0.0949 | likely_benign | 0.1113 | benign | -0.269 | Destabilizing | 0.029 | N | 0.3 | neutral | None | None | None | None | N |
V/K | 0.9946 | likely_pathogenic | 0.9958 | pathogenic | -1.643 | Destabilizing | 0.985 | D | 0.883 | deleterious | None | None | None | None | N |
V/L | 0.6103 | likely_pathogenic | 0.6675 | pathogenic | -0.269 | Destabilizing | 0.022 | N | 0.361 | neutral | D | 0.581834925 | None | None | N |
V/M | 0.5588 | ambiguous | 0.6327 | pathogenic | -0.56 | Destabilizing | 0.961 | D | 0.674 | prob.neutral | D | 0.545571647 | None | None | N |
V/N | 0.9923 | likely_pathogenic | 0.9947 | pathogenic | -2.144 | Highly Destabilizing | 0.995 | D | 0.904 | deleterious | None | None | None | None | N |
V/P | 0.9949 | likely_pathogenic | 0.9962 | pathogenic | -0.824 | Destabilizing | 0.995 | D | 0.874 | deleterious | None | None | None | None | N |
V/Q | 0.9939 | likely_pathogenic | 0.995 | pathogenic | -1.834 | Destabilizing | 0.995 | D | 0.883 | deleterious | None | None | None | None | N |
V/R | 0.9886 | likely_pathogenic | 0.9904 | pathogenic | -1.72 | Destabilizing | 0.995 | D | 0.908 | deleterious | None | None | None | None | N |
V/S | 0.9701 | likely_pathogenic | 0.9782 | pathogenic | -2.863 | Highly Destabilizing | 0.985 | D | 0.875 | deleterious | None | None | None | None | N |
V/T | 0.8875 | likely_pathogenic | 0.9106 | pathogenic | -2.396 | Highly Destabilizing | 0.904 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/W | 0.9952 | likely_pathogenic | 0.9953 | pathogenic | -1.661 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
V/Y | 0.971 | likely_pathogenic | 0.9716 | pathogenic | -1.267 | Destabilizing | 0.995 | D | 0.729 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.