Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14751 | 44476;44477;44478 | chr2:178630271;178630270;178630269 | chr2:179494998;179494997;179494996 |
N2AB | 13110 | 39553;39554;39555 | chr2:178630271;178630270;178630269 | chr2:179494998;179494997;179494996 |
N2A | 12183 | 36772;36773;36774 | chr2:178630271;178630270;178630269 | chr2:179494998;179494997;179494996 |
N2B | 5686 | 17281;17282;17283 | chr2:178630271;178630270;178630269 | chr2:179494998;179494997;179494996 |
Novex-1 | 5811 | 17656;17657;17658 | chr2:178630271;178630270;178630269 | chr2:179494998;179494997;179494996 |
Novex-2 | 5878 | 17857;17858;17859 | chr2:178630271;178630270;178630269 | chr2:179494998;179494997;179494996 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1293013607 | None | 0.293 | N | 0.497 | 0.147 | 0.203808441222 | gnomAD-4.0.0 | 6.00162E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1343 | likely_benign | 0.1638 | benign | -1.598 | Destabilizing | None | N | 0.122 | neutral | N | 0.339685288 | None | None | N |
V/C | 0.6741 | likely_pathogenic | 0.7517 | pathogenic | -0.998 | Destabilizing | 0.905 | D | 0.611 | neutral | None | None | None | None | N |
V/D | 0.7632 | likely_pathogenic | 0.7999 | pathogenic | -1.505 | Destabilizing | 0.877 | D | 0.722 | deleterious | N | 0.43549689 | None | None | N |
V/E | 0.6059 | likely_pathogenic | 0.6826 | pathogenic | -1.412 | Destabilizing | 0.571 | D | 0.565 | neutral | None | None | None | None | N |
V/F | 0.3722 | ambiguous | 0.4677 | ambiguous | -1.03 | Destabilizing | 0.877 | D | 0.674 | prob.neutral | N | 0.43782368 | None | None | N |
V/G | 0.3449 | ambiguous | 0.3999 | ambiguous | -2.015 | Highly Destabilizing | 0.172 | N | 0.555 | neutral | N | 0.425785183 | None | None | N |
V/H | 0.8277 | likely_pathogenic | 0.8844 | pathogenic | -1.603 | Destabilizing | 0.991 | D | 0.673 | prob.neutral | None | None | None | None | N |
V/I | 0.1087 | likely_benign | 0.1232 | benign | -0.51 | Destabilizing | 0.293 | N | 0.497 | neutral | N | 0.435478575 | None | None | N |
V/K | 0.6695 | likely_pathogenic | 0.7803 | pathogenic | -1.343 | Destabilizing | 0.571 | D | 0.567 | neutral | None | None | None | None | N |
V/L | 0.3609 | ambiguous | 0.4641 | ambiguous | -0.51 | Destabilizing | 0.172 | N | 0.373 | neutral | N | 0.423555025 | None | None | N |
V/M | 0.2484 | likely_benign | 0.3202 | benign | -0.389 | Destabilizing | 0.966 | D | 0.563 | neutral | None | None | None | None | N |
V/N | 0.5871 | likely_pathogenic | 0.6634 | pathogenic | -1.292 | Destabilizing | 0.905 | D | 0.73 | deleterious | None | None | None | None | N |
V/P | 0.9564 | likely_pathogenic | 0.9735 | pathogenic | -0.839 | Destabilizing | 0.73 | D | 0.649 | prob.neutral | None | None | None | None | N |
V/Q | 0.5715 | likely_pathogenic | 0.6777 | pathogenic | -1.316 | Destabilizing | 0.905 | D | 0.649 | prob.neutral | None | None | None | None | N |
V/R | 0.5725 | likely_pathogenic | 0.7028 | pathogenic | -0.971 | Destabilizing | 0.905 | D | 0.739 | deleterious | None | None | None | None | N |
V/S | 0.3013 | likely_benign | 0.3461 | ambiguous | -1.881 | Destabilizing | 0.216 | N | 0.481 | neutral | None | None | None | None | N |
V/T | 0.2498 | likely_benign | 0.2885 | benign | -1.66 | Destabilizing | 0.355 | N | 0.423 | neutral | None | None | None | None | N |
V/W | 0.9405 | likely_pathogenic | 0.9617 | pathogenic | -1.363 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/Y | 0.7386 | likely_pathogenic | 0.8314 | pathogenic | -1.01 | Destabilizing | 0.966 | D | 0.693 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.