Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14753 | 44482;44483;44484 | chr2:178630265;178630264;178630263 | chr2:179494992;179494991;179494990 |
N2AB | 13112 | 39559;39560;39561 | chr2:178630265;178630264;178630263 | chr2:179494992;179494991;179494990 |
N2A | 12185 | 36778;36779;36780 | chr2:178630265;178630264;178630263 | chr2:179494992;179494991;179494990 |
N2B | 5688 | 17287;17288;17289 | chr2:178630265;178630264;178630263 | chr2:179494992;179494991;179494990 |
Novex-1 | 5813 | 17662;17663;17664 | chr2:178630265;178630264;178630263 | chr2:179494992;179494991;179494990 |
Novex-2 | 5880 | 17863;17864;17865 | chr2:178630265;178630264;178630263 | chr2:179494992;179494991;179494990 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.895 | D | 0.797 | 0.362 | 0.397540356873 | gnomAD-4.0.0 | 1.5927E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.861E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1912 | likely_benign | 0.2411 | benign | -0.691 | Destabilizing | 0.199 | N | 0.565 | neutral | N | 0.470914346 | None | None | N |
S/C | 0.249 | likely_benign | 0.3262 | benign | -0.319 | Destabilizing | 0.009 | N | 0.542 | neutral | N | 0.439370293 | None | None | N |
S/D | 0.8895 | likely_pathogenic | 0.9529 | pathogenic | 0.41 | Stabilizing | 0.615 | D | 0.671 | prob.neutral | None | None | None | None | N |
S/E | 0.9293 | likely_pathogenic | 0.9671 | pathogenic | 0.47 | Stabilizing | 0.615 | D | 0.668 | prob.neutral | None | None | None | None | N |
S/F | 0.7456 | likely_pathogenic | 0.8812 | pathogenic | -0.784 | Destabilizing | 0.895 | D | 0.787 | deleterious | D | 0.538045773 | None | None | N |
S/G | 0.2501 | likely_benign | 0.3671 | ambiguous | -0.99 | Destabilizing | 0.615 | D | 0.622 | neutral | None | None | None | None | N |
S/H | 0.8382 | likely_pathogenic | 0.9199 | pathogenic | -1.276 | Destabilizing | 0.992 | D | 0.734 | deleterious | None | None | None | None | N |
S/I | 0.6241 | likely_pathogenic | 0.8072 | pathogenic | 0.013 | Stabilizing | 0.737 | D | 0.779 | deleterious | None | None | None | None | N |
S/K | 0.9788 | likely_pathogenic | 0.9918 | pathogenic | -0.105 | Destabilizing | 0.615 | D | 0.669 | prob.neutral | None | None | None | None | N |
S/L | 0.4345 | ambiguous | 0.6304 | pathogenic | 0.013 | Stabilizing | 0.444 | N | 0.71 | prob.delet. | None | None | None | None | N |
S/M | 0.5295 | ambiguous | 0.6684 | pathogenic | 0.052 | Stabilizing | 0.977 | D | 0.733 | deleterious | None | None | None | None | N |
S/N | 0.553 | ambiguous | 0.7253 | pathogenic | -0.226 | Destabilizing | 0.615 | D | 0.669 | prob.neutral | None | None | None | None | N |
S/P | 0.9758 | likely_pathogenic | 0.9914 | pathogenic | -0.186 | Destabilizing | 0.895 | D | 0.756 | deleterious | N | 0.496266922 | None | None | N |
S/Q | 0.9085 | likely_pathogenic | 0.9504 | pathogenic | -0.209 | Destabilizing | 0.919 | D | 0.733 | deleterious | None | None | None | None | N |
S/R | 0.9686 | likely_pathogenic | 0.9879 | pathogenic | -0.223 | Destabilizing | 0.848 | D | 0.763 | deleterious | None | None | None | None | N |
S/T | 0.1167 | likely_benign | 0.1515 | benign | -0.272 | Destabilizing | 0.004 | N | 0.343 | neutral | N | 0.435531082 | None | None | N |
S/V | 0.5294 | ambiguous | 0.6876 | pathogenic | -0.186 | Destabilizing | 0.444 | N | 0.743 | deleterious | None | None | None | None | N |
S/W | 0.8446 | likely_pathogenic | 0.9365 | pathogenic | -0.772 | Destabilizing | 0.992 | D | 0.831 | deleterious | None | None | None | None | N |
S/Y | 0.6112 | likely_pathogenic | 0.8038 | pathogenic | -0.443 | Destabilizing | 0.895 | D | 0.797 | deleterious | D | 0.538045773 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.