Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14755 | 44488;44489;44490 | chr2:178630259;178630258;178630257 | chr2:179494986;179494985;179494984 |
N2AB | 13114 | 39565;39566;39567 | chr2:178630259;178630258;178630257 | chr2:179494986;179494985;179494984 |
N2A | 12187 | 36784;36785;36786 | chr2:178630259;178630258;178630257 | chr2:179494986;179494985;179494984 |
N2B | 5690 | 17293;17294;17295 | chr2:178630259;178630258;178630257 | chr2:179494986;179494985;179494984 |
Novex-1 | 5815 | 17668;17669;17670 | chr2:178630259;178630258;178630257 | chr2:179494986;179494985;179494984 |
Novex-2 | 5882 | 17869;17870;17871 | chr2:178630259;178630258;178630257 | chr2:179494986;179494985;179494984 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.999 | D | 0.617 | 0.427 | 0.344017737713 | gnomAD-4.0.0 | 1.08029E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8225 | likely_pathogenic | 0.8597 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
A/D | 0.967 | likely_pathogenic | 0.9862 | pathogenic | -0.999 | Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.621614355 | None | None | N |
A/E | 0.9783 | likely_pathogenic | 0.9883 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/F | 0.969 | likely_pathogenic | 0.9754 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
A/G | 0.2392 | likely_benign | 0.3563 | ambiguous | -1.171 | Destabilizing | 0.999 | D | 0.618 | neutral | N | 0.509424579 | None | None | N |
A/H | 0.9858 | likely_pathogenic | 0.9905 | pathogenic | -1.323 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
A/I | 0.9596 | likely_pathogenic | 0.975 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
A/K | 0.9917 | likely_pathogenic | 0.9952 | pathogenic | -1.045 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
A/L | 0.9094 | likely_pathogenic | 0.9338 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/M | 0.943 | likely_pathogenic | 0.9616 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/N | 0.9613 | likely_pathogenic | 0.9786 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
A/P | 0.9914 | likely_pathogenic | 0.9954 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.621762804 | None | None | N |
A/Q | 0.9674 | likely_pathogenic | 0.9764 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/R | 0.9682 | likely_pathogenic | 0.9764 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/S | 0.2163 | likely_benign | 0.2923 | benign | -1.252 | Destabilizing | 0.999 | D | 0.64 | neutral | D | 0.539611957 | None | None | N |
A/T | 0.557 | ambiguous | 0.6811 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.671 | prob.neutral | N | 0.514461059 | None | None | N |
A/V | 0.8002 | likely_pathogenic | 0.864 | pathogenic | -0.511 | Destabilizing | 0.999 | D | 0.617 | neutral | D | 0.550931604 | None | None | N |
A/W | 0.9968 | likely_pathogenic | 0.9977 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/Y | 0.9876 | likely_pathogenic | 0.99 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.