Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14757 | 44494;44495;44496 | chr2:178630253;178630252;178630251 | chr2:179494980;179494979;179494978 |
N2AB | 13116 | 39571;39572;39573 | chr2:178630253;178630252;178630251 | chr2:179494980;179494979;179494978 |
N2A | 12189 | 36790;36791;36792 | chr2:178630253;178630252;178630251 | chr2:179494980;179494979;179494978 |
N2B | 5692 | 17299;17300;17301 | chr2:178630253;178630252;178630251 | chr2:179494980;179494979;179494978 |
Novex-1 | 5817 | 17674;17675;17676 | chr2:178630253;178630252;178630251 | chr2:179494980;179494979;179494978 |
Novex-2 | 5884 | 17875;17876;17877 | chr2:178630253;178630252;178630251 | chr2:179494980;179494979;179494978 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.999 | D | 0.831 | 0.393 | 0.515603885326 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9814 | likely_pathogenic | 0.9831 | pathogenic | -2.954 | Highly Destabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/C | 0.9549 | likely_pathogenic | 0.9554 | pathogenic | -2.188 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.468 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/E | 0.9969 | likely_pathogenic | 0.998 | pathogenic | -3.191 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/F | 0.7382 | likely_pathogenic | 0.8255 | pathogenic | -1.803 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.641536656 | None | None | N |
L/G | 0.9947 | likely_pathogenic | 0.9957 | pathogenic | -3.55 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/H | 0.9925 | likely_pathogenic | 0.9947 | pathogenic | -3.031 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.644762009 | None | None | N |
L/I | 0.2923 | likely_benign | 0.3519 | ambiguous | -1.194 | Destabilizing | 0.779 | D | 0.277 | neutral | D | 0.63756027 | None | None | N |
L/K | 0.9913 | likely_pathogenic | 0.9946 | pathogenic | -2.485 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/M | 0.5162 | ambiguous | 0.5873 | pathogenic | -1.114 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | N |
L/N | 0.9978 | likely_pathogenic | 0.9985 | pathogenic | -3.006 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/P | 0.9974 | likely_pathogenic | 0.9987 | pathogenic | -1.767 | Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.644762009 | None | None | N |
L/Q | 0.9854 | likely_pathogenic | 0.991 | pathogenic | -2.774 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/R | 0.9807 | likely_pathogenic | 0.9873 | pathogenic | -2.219 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | D | 0.643160475 | None | None | N |
L/S | 0.9967 | likely_pathogenic | 0.9975 | pathogenic | -3.683 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/T | 0.9866 | likely_pathogenic | 0.9885 | pathogenic | -3.25 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
L/V | 0.4157 | ambiguous | 0.4504 | ambiguous | -1.767 | Destabilizing | 0.959 | D | 0.584 | neutral | D | 0.589561095 | None | None | N |
L/W | 0.977 | likely_pathogenic | 0.9847 | pathogenic | -2.255 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/Y | 0.9817 | likely_pathogenic | 0.9875 | pathogenic | -2.0 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.