Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14759 | 44500;44501;44502 | chr2:178630247;178630246;178630245 | chr2:179494974;179494973;179494972 |
N2AB | 13118 | 39577;39578;39579 | chr2:178630247;178630246;178630245 | chr2:179494974;179494973;179494972 |
N2A | 12191 | 36796;36797;36798 | chr2:178630247;178630246;178630245 | chr2:179494974;179494973;179494972 |
N2B | 5694 | 17305;17306;17307 | chr2:178630247;178630246;178630245 | chr2:179494974;179494973;179494972 |
Novex-1 | 5819 | 17680;17681;17682 | chr2:178630247;178630246;178630245 | chr2:179494974;179494973;179494972 |
Novex-2 | 5886 | 17881;17882;17883 | chr2:178630247;178630246;178630245 | chr2:179494974;179494973;179494972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.999 | D | 0.849 | 0.641 | 0.756160954892 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9315 | likely_pathogenic | 0.9555 | pathogenic | -2.321 | Highly Destabilizing | 0.997 | D | 0.53 | neutral | D | 0.67817143 | None | None | N |
V/C | 0.9805 | likely_pathogenic | 0.9853 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/D | 0.9957 | likely_pathogenic | 0.9978 | pathogenic | -3.28 | Highly Destabilizing | 0.999 | D | 0.849 | deleterious | D | 0.68148407 | None | None | N |
V/E | 0.9841 | likely_pathogenic | 0.9901 | pathogenic | -3.139 | Highly Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
V/F | 0.9248 | likely_pathogenic | 0.9501 | pathogenic | -1.334 | Destabilizing | 0.999 | D | 0.866 | deleterious | D | 0.681112696 | None | None | N |
V/G | 0.899 | likely_pathogenic | 0.9337 | pathogenic | -2.739 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.68148407 | None | None | N |
V/H | 0.9979 | likely_pathogenic | 0.9985 | pathogenic | -2.285 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/I | 0.1466 | likely_benign | 0.15 | benign | -1.165 | Destabilizing | 0.994 | D | 0.502 | neutral | D | 0.552690579 | None | None | N |
V/K | 0.9885 | likely_pathogenic | 0.993 | pathogenic | -2.01 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
V/L | 0.8233 | likely_pathogenic | 0.8468 | pathogenic | -1.165 | Destabilizing | 0.994 | D | 0.54 | neutral | D | 0.676411813 | None | None | N |
V/M | 0.8576 | likely_pathogenic | 0.9074 | pathogenic | -1.265 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
V/N | 0.9865 | likely_pathogenic | 0.9917 | pathogenic | -2.221 | Highly Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
V/P | 0.9887 | likely_pathogenic | 0.9915 | pathogenic | -1.527 | Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
V/Q | 0.9881 | likely_pathogenic | 0.992 | pathogenic | -2.196 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/R | 0.9799 | likely_pathogenic | 0.9864 | pathogenic | -1.609 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
V/S | 0.9702 | likely_pathogenic | 0.9802 | pathogenic | -2.687 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
V/T | 0.9473 | likely_pathogenic | 0.9629 | pathogenic | -2.444 | Highly Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
V/W | 0.9983 | likely_pathogenic | 0.9989 | pathogenic | -1.785 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
V/Y | 0.9926 | likely_pathogenic | 0.9945 | pathogenic | -1.554 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.