Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14767 | 44524;44525;44526 | chr2:178629426;178629425;178629424 | chr2:179494153;179494152;179494151 |
N2AB | 13126 | 39601;39602;39603 | chr2:178629426;178629425;178629424 | chr2:179494153;179494152;179494151 |
N2A | 12199 | 36820;36821;36822 | chr2:178629426;178629425;178629424 | chr2:179494153;179494152;179494151 |
N2B | 5702 | 17329;17330;17331 | chr2:178629426;178629425;178629424 | chr2:179494153;179494152;179494151 |
Novex-1 | 5827 | 17704;17705;17706 | chr2:178629426;178629425;178629424 | chr2:179494153;179494152;179494151 |
Novex-2 | 5894 | 17905;17906;17907 | chr2:178629426;178629425;178629424 | chr2:179494153;179494152;179494151 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.4 | N | 0.408 | 0.057 | 0.253205268125 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 5.67472E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4 | ambiguous | 0.4726 | ambiguous | -1.139 | Destabilizing | 0.985 | D | 0.596 | neutral | None | None | None | None | N |
L/C | 0.6816 | likely_pathogenic | 0.7303 | pathogenic | -0.759 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
L/D | 0.8344 | likely_pathogenic | 0.8751 | pathogenic | -0.322 | Destabilizing | 0.991 | D | 0.625 | neutral | None | None | None | None | N |
L/E | 0.448 | ambiguous | 0.5167 | ambiguous | -0.363 | Destabilizing | 0.671 | D | 0.515 | neutral | None | None | None | None | N |
L/F | 0.2847 | likely_benign | 0.3323 | benign | -0.781 | Destabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | N |
L/G | 0.7165 | likely_pathogenic | 0.7569 | pathogenic | -1.387 | Destabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | N |
L/H | 0.379 | ambiguous | 0.4239 | ambiguous | -0.473 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
L/I | 0.1064 | likely_benign | 0.113 | benign | -0.57 | Destabilizing | 0.971 | D | 0.615 | neutral | None | None | None | None | N |
L/K | 0.3599 | ambiguous | 0.372 | ambiguous | -0.669 | Destabilizing | 0.996 | D | 0.6 | neutral | None | None | None | None | N |
L/M | 0.1693 | likely_benign | 0.1916 | benign | -0.511 | Destabilizing | 0.911 | D | 0.529 | neutral | N | 0.439552293 | None | None | N |
L/N | 0.5554 | ambiguous | 0.5838 | pathogenic | -0.498 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
L/P | 0.8117 | likely_pathogenic | 0.8513 | pathogenic | -0.726 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.495529796 | None | None | N |
L/Q | 0.1956 | likely_benign | 0.2273 | benign | -0.7 | Destabilizing | 0.994 | D | 0.64 | neutral | N | 0.51951684 | None | None | N |
L/R | 0.2748 | likely_benign | 0.2893 | benign | -0.061 | Destabilizing | 0.994 | D | 0.635 | neutral | N | 0.453199503 | None | None | N |
L/S | 0.4506 | ambiguous | 0.5084 | ambiguous | -1.084 | Destabilizing | 0.971 | D | 0.601 | neutral | None | None | None | None | N |
L/T | 0.3237 | likely_benign | 0.3578 | ambiguous | -1.014 | Destabilizing | 0.671 | D | 0.411 | neutral | None | None | None | None | N |
L/V | 0.1153 | likely_benign | 0.1259 | benign | -0.726 | Destabilizing | 0.4 | N | 0.408 | neutral | N | 0.440193694 | None | None | N |
L/W | 0.4497 | ambiguous | 0.5134 | ambiguous | -0.779 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
L/Y | 0.564 | likely_pathogenic | 0.6072 | pathogenic | -0.566 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.