Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14773 | 44542;44543;44544 | chr2:178629408;178629407;178629406 | chr2:179494135;179494134;179494133 |
N2AB | 13132 | 39619;39620;39621 | chr2:178629408;178629407;178629406 | chr2:179494135;179494134;179494133 |
N2A | 12205 | 36838;36839;36840 | chr2:178629408;178629407;178629406 | chr2:179494135;179494134;179494133 |
N2B | 5708 | 17347;17348;17349 | chr2:178629408;178629407;178629406 | chr2:179494135;179494134;179494133 |
Novex-1 | 5833 | 17722;17723;17724 | chr2:178629408;178629407;178629406 | chr2:179494135;179494134;179494133 |
Novex-2 | 5900 | 17923;17924;17925 | chr2:178629408;178629407;178629406 | chr2:179494135;179494134;179494133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2059498760 | None | 0.002 | D | 0.322 | 0.138 | 0.522717468363 | gnomAD-4.0.0 | 1.59312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0281E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.331 | likely_benign | 0.3865 | ambiguous | -1.17 | Destabilizing | 0.007 | N | 0.344 | neutral | D | 0.559416857 | None | None | N |
V/C | 0.8448 | likely_pathogenic | 0.8562 | pathogenic | -0.812 | Destabilizing | 0.982 | D | 0.559 | neutral | None | None | None | None | N |
V/D | 0.746 | likely_pathogenic | 0.7874 | pathogenic | -0.688 | Destabilizing | 0.781 | D | 0.699 | prob.neutral | D | 0.722892208 | None | None | N |
V/E | 0.5465 | ambiguous | 0.5768 | pathogenic | -0.673 | Destabilizing | 0.826 | D | 0.632 | neutral | None | None | None | None | N |
V/F | 0.4087 | ambiguous | 0.4614 | ambiguous | -0.857 | Destabilizing | 0.638 | D | 0.583 | neutral | D | 0.721420955 | None | None | N |
V/G | 0.5531 | ambiguous | 0.6006 | pathogenic | -1.486 | Destabilizing | 0.638 | D | 0.622 | neutral | D | 0.68478078 | None | None | N |
V/H | 0.8297 | likely_pathogenic | 0.8534 | pathogenic | -0.987 | Destabilizing | 0.982 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/I | 0.0869 | likely_benign | 0.0892 | benign | -0.408 | Destabilizing | 0.002 | N | 0.322 | neutral | D | 0.543553858 | None | None | N |
V/K | 0.5172 | ambiguous | 0.5515 | ambiguous | -0.904 | Destabilizing | 0.826 | D | 0.635 | neutral | None | None | None | None | N |
V/L | 0.4333 | ambiguous | 0.4735 | ambiguous | -0.408 | Destabilizing | 0.034 | N | 0.378 | neutral | N | 0.518625416 | None | None | N |
V/M | 0.2128 | likely_benign | 0.2326 | benign | -0.423 | Destabilizing | 0.7 | D | 0.491 | neutral | None | None | None | None | N |
V/N | 0.5464 | ambiguous | 0.6331 | pathogenic | -0.758 | Destabilizing | 0.935 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/P | 0.9861 | likely_pathogenic | 0.9885 | pathogenic | -0.626 | Destabilizing | 0.826 | D | 0.647 | neutral | None | None | None | None | N |
V/Q | 0.4924 | ambiguous | 0.5135 | ambiguous | -0.853 | Destabilizing | 0.935 | D | 0.665 | neutral | None | None | None | None | N |
V/R | 0.5164 | ambiguous | 0.523 | ambiguous | -0.504 | Destabilizing | 0.826 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/S | 0.4665 | ambiguous | 0.5307 | ambiguous | -1.297 | Destabilizing | 0.539 | D | 0.563 | neutral | None | None | None | None | N |
V/T | 0.2657 | likely_benign | 0.3022 | benign | -1.157 | Destabilizing | 0.399 | N | 0.415 | neutral | None | None | None | None | N |
V/W | 0.9719 | likely_pathogenic | 0.9691 | pathogenic | -1.052 | Destabilizing | 0.982 | D | 0.651 | neutral | None | None | None | None | N |
V/Y | 0.8299 | likely_pathogenic | 0.8515 | pathogenic | -0.721 | Destabilizing | 0.826 | D | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.