Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14782 | 44569;44570;44571 | chr2:178629381;178629380;178629379 | chr2:179494108;179494107;179494106 |
N2AB | 13141 | 39646;39647;39648 | chr2:178629381;178629380;178629379 | chr2:179494108;179494107;179494106 |
N2A | 12214 | 36865;36866;36867 | chr2:178629381;178629380;178629379 | chr2:179494108;179494107;179494106 |
N2B | 5717 | 17374;17375;17376 | chr2:178629381;178629380;178629379 | chr2:179494108;179494107;179494106 |
Novex-1 | 5842 | 17749;17750;17751 | chr2:178629381;178629380;178629379 | chr2:179494108;179494107;179494106 |
Novex-2 | 5909 | 17950;17951;17952 | chr2:178629381;178629380;178629379 | chr2:179494108;179494107;179494106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs780249806 | -0.785 | 0.962 | D | 0.523 | 0.343 | 0.162503812791 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
T/A | rs780249806 | -0.785 | 0.962 | D | 0.523 | 0.343 | 0.162503812791 | gnomAD-4.0.0 | 1.5931E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78552E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1014 | likely_benign | 0.1034 | benign | -0.94 | Destabilizing | 0.962 | D | 0.523 | neutral | D | 0.570219515 | None | None | N |
T/C | 0.555 | ambiguous | 0.5247 | ambiguous | -0.479 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/D | 0.554 | ambiguous | 0.5891 | pathogenic | 0.109 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/E | 0.4434 | ambiguous | 0.4823 | ambiguous | 0.121 | Stabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/F | 0.345 | ambiguous | 0.3546 | ambiguous | -1.089 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
T/G | 0.3596 | ambiguous | 0.3493 | ambiguous | -1.197 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | N |
T/H | 0.3369 | likely_benign | 0.3457 | ambiguous | -1.398 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/I | 0.1922 | likely_benign | 0.1991 | benign | -0.345 | Destabilizing | 0.999 | D | 0.75 | deleterious | N | 0.474998775 | None | None | N |
T/K | 0.2867 | likely_benign | 0.3424 | ambiguous | -0.579 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/L | 0.1559 | likely_benign | 0.1597 | benign | -0.345 | Destabilizing | 0.994 | D | 0.615 | neutral | None | None | None | None | N |
T/M | 0.1328 | likely_benign | 0.1349 | benign | -0.105 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/N | 0.1834 | likely_benign | 0.195 | benign | -0.551 | Destabilizing | 0.998 | D | 0.645 | neutral | N | 0.511692741 | None | None | N |
T/P | 0.5312 | ambiguous | 0.5555 | ambiguous | -0.512 | Destabilizing | 0.999 | D | 0.75 | deleterious | D | 0.6342865 | None | None | N |
T/Q | 0.3011 | likely_benign | 0.3126 | benign | -0.646 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
T/R | 0.2271 | likely_benign | 0.2524 | benign | -0.4 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
T/S | 0.1331 | likely_benign | 0.1327 | benign | -0.891 | Destabilizing | 0.619 | D | 0.353 | neutral | N | 0.452713789 | None | None | N |
T/V | 0.1421 | likely_benign | 0.1407 | benign | -0.512 | Destabilizing | 0.994 | D | 0.551 | neutral | None | None | None | None | N |
T/W | 0.7609 | likely_pathogenic | 0.7505 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/Y | 0.4148 | ambiguous | 0.411 | ambiguous | -0.775 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.