Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14787 | 44584;44585;44586 | chr2:178629366;178629365;178629364 | chr2:179494093;179494092;179494091 |
N2AB | 13146 | 39661;39662;39663 | chr2:178629366;178629365;178629364 | chr2:179494093;179494092;179494091 |
N2A | 12219 | 36880;36881;36882 | chr2:178629366;178629365;178629364 | chr2:179494093;179494092;179494091 |
N2B | 5722 | 17389;17390;17391 | chr2:178629366;178629365;178629364 | chr2:179494093;179494092;179494091 |
Novex-1 | 5847 | 17764;17765;17766 | chr2:178629366;178629365;178629364 | chr2:179494093;179494092;179494091 |
Novex-2 | 5914 | 17965;17966;17967 | chr2:178629366;178629365;178629364 | chr2:179494093;179494092;179494091 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.801 | 0.447 | 0.5551182358 | gnomAD-4.0.0 | 6.84568E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99803E-07 | 0 | 0 |
L/I | None | None | 0.999 | N | 0.557 | 0.247 | 0.403752378121 | gnomAD-4.0.0 | 1.36914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87329E-05 | 0 | 8.99803E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9531 | likely_pathogenic | 0.9611 | pathogenic | -2.486 | Highly Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
L/C | 0.9567 | likely_pathogenic | 0.9674 | pathogenic | -1.511 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/D | 0.9978 | likely_pathogenic | 0.9987 | pathogenic | -3.163 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/E | 0.9929 | likely_pathogenic | 0.9954 | pathogenic | -2.858 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/F | 0.7192 | likely_pathogenic | 0.7792 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.569413913 | None | None | N |
L/G | 0.987 | likely_pathogenic | 0.99 | pathogenic | -3.069 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/H | 0.9845 | likely_pathogenic | 0.9918 | pathogenic | -2.843 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.690546217 | None | None | N |
L/I | 0.2486 | likely_benign | 0.3263 | benign | -0.741 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.490660065 | None | None | N |
L/K | 0.9863 | likely_pathogenic | 0.9917 | pathogenic | -1.729 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
L/M | 0.3859 | ambiguous | 0.4598 | ambiguous | -0.839 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
L/N | 0.9877 | likely_pathogenic | 0.9926 | pathogenic | -2.367 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/P | 0.9932 | likely_pathogenic | 0.9959 | pathogenic | -1.313 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.690546217 | None | None | N |
L/Q | 0.9807 | likely_pathogenic | 0.9886 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/R | 0.9771 | likely_pathogenic | 0.9856 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.690546217 | None | None | N |
L/S | 0.9893 | likely_pathogenic | 0.9933 | pathogenic | -2.903 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/T | 0.9125 | likely_pathogenic | 0.938 | pathogenic | -2.446 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/V | 0.3127 | likely_benign | 0.3714 | ambiguous | -1.313 | Destabilizing | 0.999 | D | 0.547 | neutral | N | 0.473619222 | None | None | N |
L/W | 0.9652 | likely_pathogenic | 0.9787 | pathogenic | -1.956 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/Y | 0.969 | likely_pathogenic | 0.9793 | pathogenic | -1.678 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.