Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1480 | 4663;4664;4665 | chr2:178777746;178777745;178777744 | chr2:179642473;179642472;179642471 |
N2AB | 1480 | 4663;4664;4665 | chr2:178777746;178777745;178777744 | chr2:179642473;179642472;179642471 |
N2A | 1480 | 4663;4664;4665 | chr2:178777746;178777745;178777744 | chr2:179642473;179642472;179642471 |
N2B | 1434 | 4525;4526;4527 | chr2:178777746;178777745;178777744 | chr2:179642473;179642472;179642471 |
Novex-1 | 1434 | 4525;4526;4527 | chr2:178777746;178777745;178777744 | chr2:179642473;179642472;179642471 |
Novex-2 | 1434 | 4525;4526;4527 | chr2:178777746;178777745;178777744 | chr2:179642473;179642472;179642471 |
Novex-3 | 1480 | 4663;4664;4665 | chr2:178777746;178777745;178777744 | chr2:179642473;179642472;179642471 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.601 | 0.61 | 0.746554498716 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
V/L | None | None | 0.997 | D | 0.627 | 0.55 | 0.689064770846 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8169 | likely_pathogenic | 0.8128 | pathogenic | -2.099 | Highly Destabilizing | 0.999 | D | 0.601 | neutral | D | 0.532459561 | None | None | N |
V/C | 0.9833 | likely_pathogenic | 0.9833 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/D | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -2.777 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | D | 0.810871032 | None | None | N |
V/E | 0.9949 | likely_pathogenic | 0.9947 | pathogenic | -2.568 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
V/F | 0.9666 | likely_pathogenic | 0.9667 | pathogenic | -1.153 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.657360819 | None | None | N |
V/G | 0.941 | likely_pathogenic | 0.9415 | pathogenic | -2.618 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.738637061 | None | None | N |
V/H | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -2.354 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/I | 0.2191 | likely_benign | 0.2104 | benign | -0.65 | Destabilizing | 0.997 | D | 0.542 | neutral | D | 0.561997815 | None | None | N |
V/K | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -1.728 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/L | 0.9003 | likely_pathogenic | 0.8951 | pathogenic | -0.65 | Destabilizing | 0.997 | D | 0.627 | neutral | D | 0.649022803 | None | None | N |
V/M | 0.8876 | likely_pathogenic | 0.8774 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
V/N | 0.9953 | likely_pathogenic | 0.9953 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/P | 0.9958 | likely_pathogenic | 0.9952 | pathogenic | -1.107 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/Q | 0.9965 | likely_pathogenic | 0.9962 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9962 | likely_pathogenic | 0.9961 | pathogenic | -1.544 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/S | 0.9606 | likely_pathogenic | 0.9594 | pathogenic | -2.604 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/T | 0.8728 | likely_pathogenic | 0.8636 | pathogenic | -2.264 | Highly Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
V/W | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.687 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9966 | likely_pathogenic | 0.9966 | pathogenic | -1.331 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.