Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14801 | 44626;44627;44628 | chr2:178629324;178629323;178629322 | chr2:179494051;179494050;179494049 |
N2AB | 13160 | 39703;39704;39705 | chr2:178629324;178629323;178629322 | chr2:179494051;179494050;179494049 |
N2A | 12233 | 36922;36923;36924 | chr2:178629324;178629323;178629322 | chr2:179494051;179494050;179494049 |
N2B | 5736 | 17431;17432;17433 | chr2:178629324;178629323;178629322 | chr2:179494051;179494050;179494049 |
Novex-1 | 5861 | 17806;17807;17808 | chr2:178629324;178629323;178629322 | chr2:179494051;179494050;179494049 |
Novex-2 | 5928 | 18007;18008;18009 | chr2:178629324;178629323;178629322 | chr2:179494051;179494050;179494049 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1313794493 | 0.408 | 0.101 | N | 0.362 | 0.16 | 0.243398259712 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14916E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1313794493 | 0.408 | 0.101 | N | 0.362 | 0.16 | 0.243398259712 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs1313794493 | 0.408 | 0.101 | N | 0.362 | 0.16 | 0.243398259712 | gnomAD-4.0.0 | 6.57652E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.007 | N | 0.257 | 0.084 | 0.292787519742 | gnomAD-4.0.0 | 3.18748E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2383 | likely_benign | 0.2703 | benign | -0.261 | Destabilizing | 0.129 | N | 0.317 | neutral | None | None | None | None | N |
K/C | 0.5832 | likely_pathogenic | 0.5784 | pathogenic | -0.587 | Destabilizing | 0.983 | D | 0.293 | neutral | None | None | None | None | N |
K/D | 0.3772 | ambiguous | 0.3985 | ambiguous | 0.199 | Stabilizing | 0.418 | N | 0.349 | neutral | None | None | None | None | N |
K/E | 0.096 | likely_benign | 0.0976 | benign | 0.283 | Stabilizing | 0.101 | N | 0.362 | neutral | N | 0.469217228 | None | None | N |
K/F | 0.634 | likely_pathogenic | 0.65 | pathogenic | -0.213 | Destabilizing | 0.836 | D | 0.316 | neutral | None | None | None | None | N |
K/G | 0.3467 | ambiguous | 0.3777 | ambiguous | -0.532 | Destabilizing | 0.264 | N | 0.363 | neutral | None | None | None | None | N |
K/H | 0.2393 | likely_benign | 0.2323 | benign | -0.601 | Destabilizing | 0.836 | D | 0.31 | neutral | None | None | None | None | N |
K/I | 0.2138 | likely_benign | 0.2124 | benign | 0.404 | Stabilizing | 0.716 | D | 0.336 | neutral | None | None | None | None | N |
K/L | 0.2332 | likely_benign | 0.2541 | benign | 0.404 | Stabilizing | 0.418 | N | 0.362 | neutral | None | None | None | None | N |
K/M | 0.1498 | likely_benign | 0.1578 | benign | -0.064 | Destabilizing | 0.794 | D | 0.309 | neutral | N | 0.517044489 | None | None | N |
K/N | 0.1959 | likely_benign | 0.2164 | benign | -0.257 | Destabilizing | 0.213 | N | 0.272 | neutral | N | 0.511970565 | None | None | N |
K/P | 0.8334 | likely_pathogenic | 0.8677 | pathogenic | 0.211 | Stabilizing | 0.593 | D | 0.361 | neutral | None | None | None | None | N |
K/Q | 0.08 | likely_benign | 0.0808 | benign | -0.26 | Destabilizing | 0.007 | N | 0.17 | neutral | N | 0.44537127 | None | None | N |
K/R | 0.0837 | likely_benign | 0.0776 | benign | -0.157 | Destabilizing | 0.007 | N | 0.257 | neutral | N | 0.507225092 | None | None | N |
K/S | 0.2485 | likely_benign | 0.2711 | benign | -0.805 | Destabilizing | 0.01 | N | 0.214 | neutral | None | None | None | None | N |
K/T | 0.1094 | likely_benign | 0.1218 | benign | -0.537 | Destabilizing | 0.003 | N | 0.179 | neutral | N | 0.485925319 | None | None | N |
K/V | 0.1888 | likely_benign | 0.1908 | benign | 0.211 | Stabilizing | 0.418 | N | 0.364 | neutral | None | None | None | None | N |
K/W | 0.6864 | likely_pathogenic | 0.6847 | pathogenic | -0.214 | Destabilizing | 0.983 | D | 0.307 | neutral | None | None | None | None | N |
K/Y | 0.5264 | ambiguous | 0.5234 | ambiguous | 0.115 | Stabilizing | 0.94 | D | 0.309 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.