Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14802 | 44629;44630;44631 | chr2:178629321;178629320;178629319 | chr2:179494048;179494047;179494046 |
N2AB | 13161 | 39706;39707;39708 | chr2:178629321;178629320;178629319 | chr2:179494048;179494047;179494046 |
N2A | 12234 | 36925;36926;36927 | chr2:178629321;178629320;178629319 | chr2:179494048;179494047;179494046 |
N2B | 5737 | 17434;17435;17436 | chr2:178629321;178629320;178629319 | chr2:179494048;179494047;179494046 |
Novex-1 | 5862 | 17809;17810;17811 | chr2:178629321;178629320;178629319 | chr2:179494048;179494047;179494046 |
Novex-2 | 5929 | 18010;18011;18012 | chr2:178629321;178629320;178629319 | chr2:179494048;179494047;179494046 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.992 | N | 0.52 | 0.347 | 0.371718192555 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3651 | ambiguous | 0.4531 | ambiguous | -0.47 | Destabilizing | 0.997 | D | 0.585 | neutral | None | None | None | None | N |
K/C | 0.679 | likely_pathogenic | 0.7379 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/D | 0.7803 | likely_pathogenic | 0.8675 | pathogenic | -0.111 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | N |
K/E | 0.265 | likely_benign | 0.3354 | benign | 0.015 | Stabilizing | 0.992 | D | 0.52 | neutral | N | 0.479078255 | None | None | N |
K/F | 0.7525 | likely_pathogenic | 0.848 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/G | 0.6327 | likely_pathogenic | 0.7272 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
K/H | 0.392 | ambiguous | 0.475 | ambiguous | -1.009 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
K/I | 0.2208 | likely_benign | 0.2951 | benign | 0.476 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.507898426 | None | None | N |
K/L | 0.2304 | likely_benign | 0.2897 | benign | 0.476 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
K/M | 0.1538 | likely_benign | 0.2012 | benign | 0.102 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/N | 0.4981 | ambiguous | 0.628 | pathogenic | -0.456 | Destabilizing | 0.999 | D | 0.634 | neutral | N | 0.504244797 | None | None | N |
K/P | 0.4328 | ambiguous | 0.5001 | ambiguous | 0.19 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Q | 0.1604 | likely_benign | 0.1892 | benign | -0.427 | Destabilizing | 0.957 | D | 0.294 | neutral | N | 0.495996007 | None | None | N |
K/R | 0.104 | likely_benign | 0.1102 | benign | -0.547 | Destabilizing | 0.996 | D | 0.527 | neutral | N | 0.493765252 | None | None | N |
K/S | 0.5773 | likely_pathogenic | 0.6934 | pathogenic | -1.007 | Destabilizing | 0.997 | D | 0.575 | neutral | None | None | None | None | N |
K/T | 0.2252 | likely_benign | 0.3198 | benign | -0.681 | Destabilizing | 0.999 | D | 0.657 | neutral | N | 0.506083591 | None | None | N |
K/V | 0.2488 | likely_benign | 0.3181 | benign | 0.19 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
K/W | 0.8093 | likely_pathogenic | 0.8686 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/Y | 0.6396 | likely_pathogenic | 0.7278 | pathogenic | 0.282 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.