Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14804 | 44635;44636;44637 | chr2:178629315;178629314;178629313 | chr2:179494042;179494041;179494040 |
N2AB | 13163 | 39712;39713;39714 | chr2:178629315;178629314;178629313 | chr2:179494042;179494041;179494040 |
N2A | 12236 | 36931;36932;36933 | chr2:178629315;178629314;178629313 | chr2:179494042;179494041;179494040 |
N2B | 5739 | 17440;17441;17442 | chr2:178629315;178629314;178629313 | chr2:179494042;179494041;179494040 |
Novex-1 | 5864 | 17815;17816;17817 | chr2:178629315;178629314;178629313 | chr2:179494042;179494041;179494040 |
Novex-2 | 5931 | 18016;18017;18018 | chr2:178629315;178629314;178629313 | chr2:179494042;179494041;179494040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 1.0 | N | 0.694 | 0.492 | 0.688307381067 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1217 | likely_benign | 0.1233 | benign | -0.117 | Destabilizing | 0.999 | D | 0.669 | neutral | D | 0.5431021 | None | None | N |
E/C | 0.7877 | likely_pathogenic | 0.7817 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
E/D | 0.1251 | likely_benign | 0.1255 | benign | -0.396 | Destabilizing | 0.999 | D | 0.491 | neutral | N | 0.508330597 | None | None | N |
E/F | 0.551 | ambiguous | 0.5866 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/G | 0.1548 | likely_benign | 0.1624 | benign | -0.293 | Destabilizing | 1.0 | D | 0.648 | neutral | D | 0.536866685 | None | None | N |
E/H | 0.3893 | ambiguous | 0.4019 | ambiguous | 0.699 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.2011 | likely_benign | 0.2167 | benign | 0.307 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/K | 0.1425 | likely_benign | 0.1558 | benign | 0.368 | Stabilizing | 0.999 | D | 0.639 | neutral | N | 0.482672908 | None | None | N |
E/L | 0.2174 | likely_benign | 0.2194 | benign | 0.307 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/M | 0.3115 | likely_benign | 0.3146 | benign | 0.022 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
E/N | 0.2215 | likely_benign | 0.2396 | benign | -0.144 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/P | 0.3492 | ambiguous | 0.3551 | ambiguous | 0.185 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/Q | 0.1179 | likely_benign | 0.1195 | benign | -0.079 | Destabilizing | 1.0 | D | 0.585 | neutral | N | 0.493704679 | None | None | N |
E/R | 0.249 | likely_benign | 0.261 | benign | 0.729 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/S | 0.1655 | likely_benign | 0.1728 | benign | -0.25 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
E/T | 0.1672 | likely_benign | 0.176 | benign | -0.09 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/V | 0.122 | likely_benign | 0.1272 | benign | 0.185 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.51391892 | None | None | N |
E/W | 0.8343 | likely_pathogenic | 0.855 | pathogenic | 0.224 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/Y | 0.473 | ambiguous | 0.5056 | ambiguous | 0.338 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.