Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14813 | 44662;44663;44664 | chr2:178625384;178625383;178625382 | chr2:179490111;179490110;179490109 |
N2AB | 13172 | 39739;39740;39741 | chr2:178625384;178625383;178625382 | chr2:179490111;179490110;179490109 |
N2A | 12245 | 36958;36959;36960 | chr2:178625384;178625383;178625382 | chr2:179490111;179490110;179490109 |
N2B | 5748 | 17467;17468;17469 | chr2:178625384;178625383;178625382 | chr2:179490111;179490110;179490109 |
Novex-1 | 5873 | 17842;17843;17844 | chr2:178625384;178625383;178625382 | chr2:179490111;179490110;179490109 |
Novex-2 | 5940 | 18043;18044;18045 | chr2:178625384;178625383;178625382 | chr2:179490111;179490110;179490109 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.625 | N | 0.399 | 0.113 | 0.209622950755 | gnomAD-4.0.0 | 1.68559E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.96813E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0715 | likely_benign | 0.068 | benign | -0.469 | Destabilizing | 0.002 | N | 0.233 | neutral | N | 0.427433977 | None | None | N |
S/C | 0.1149 | likely_benign | 0.1116 | benign | -0.237 | Destabilizing | 0.974 | D | 0.458 | neutral | None | None | None | None | N |
S/D | 0.4662 | ambiguous | 0.543 | ambiguous | -0.136 | Destabilizing | 0.915 | D | 0.451 | neutral | None | None | None | None | N |
S/E | 0.507 | ambiguous | 0.566 | pathogenic | -0.216 | Destabilizing | 0.842 | D | 0.397 | neutral | None | None | None | None | N |
S/F | 0.2312 | likely_benign | 0.2231 | benign | -0.941 | Destabilizing | 0.974 | D | 0.56 | neutral | None | None | None | None | N |
S/G | 0.1089 | likely_benign | 0.1183 | benign | -0.619 | Destabilizing | 0.525 | D | 0.411 | neutral | None | None | None | None | N |
S/H | 0.3383 | likely_benign | 0.3536 | ambiguous | -1.178 | Destabilizing | 0.998 | D | 0.457 | neutral | None | None | None | None | N |
S/I | 0.1717 | likely_benign | 0.1769 | benign | -0.197 | Destabilizing | 0.728 | D | 0.511 | neutral | None | None | None | None | N |
S/K | 0.5441 | ambiguous | 0.559 | ambiguous | -0.626 | Destabilizing | 0.842 | D | 0.395 | neutral | None | None | None | None | N |
S/L | 0.1195 | likely_benign | 0.1142 | benign | -0.197 | Destabilizing | 0.454 | N | 0.517 | neutral | N | 0.512093164 | None | None | N |
S/M | 0.2193 | likely_benign | 0.2154 | benign | 0.183 | Stabilizing | 0.974 | D | 0.465 | neutral | None | None | None | None | N |
S/N | 0.1657 | likely_benign | 0.1945 | benign | -0.32 | Destabilizing | 0.915 | D | 0.48 | neutral | None | None | None | None | N |
S/P | 0.3242 | likely_benign | 0.3617 | ambiguous | -0.257 | Destabilizing | 0.966 | D | 0.456 | neutral | N | 0.513531673 | None | None | N |
S/Q | 0.4491 | ambiguous | 0.4588 | ambiguous | -0.604 | Destabilizing | 0.974 | D | 0.479 | neutral | None | None | None | None | N |
S/R | 0.4303 | ambiguous | 0.4529 | ambiguous | -0.397 | Destabilizing | 0.974 | D | 0.467 | neutral | None | None | None | None | N |
S/T | 0.0914 | likely_benign | 0.0925 | benign | -0.4 | Destabilizing | 0.625 | D | 0.399 | neutral | N | 0.488187177 | None | None | N |
S/V | 0.1651 | likely_benign | 0.1625 | benign | -0.257 | Destabilizing | 0.067 | N | 0.39 | neutral | None | None | None | None | N |
S/W | 0.3155 | likely_benign | 0.3255 | benign | -0.923 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
S/Y | 0.1813 | likely_benign | 0.1909 | benign | -0.667 | Destabilizing | 0.991 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.