Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14814 | 44665;44666;44667 | chr2:178625381;178625380;178625379 | chr2:179490108;179490107;179490106 |
N2AB | 13173 | 39742;39743;39744 | chr2:178625381;178625380;178625379 | chr2:179490108;179490107;179490106 |
N2A | 12246 | 36961;36962;36963 | chr2:178625381;178625380;178625379 | chr2:179490108;179490107;179490106 |
N2B | 5749 | 17470;17471;17472 | chr2:178625381;178625380;178625379 | chr2:179490108;179490107;179490106 |
Novex-1 | 5874 | 17845;17846;17847 | chr2:178625381;178625380;178625379 | chr2:179490108;179490107;179490106 |
Novex-2 | 5941 | 18046;18047;18048 | chr2:178625381;178625380;178625379 | chr2:179490108;179490107;179490106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.174 | 0.05 | 0.288727942641 | gnomAD-4.0.0 | 6.99536E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.09182E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.172 | likely_benign | 0.2037 | benign | -0.049 | Destabilizing | 0.004 | N | 0.221 | neutral | D | 0.537882055 | None | None | N |
E/C | 0.8762 | likely_pathogenic | 0.9084 | pathogenic | -0.046 | Destabilizing | 0.968 | D | 0.495 | neutral | None | None | None | None | N |
E/D | 0.1317 | likely_benign | 0.1522 | benign | -0.264 | Destabilizing | None | N | 0.174 | neutral | N | 0.501054178 | None | None | N |
E/F | 0.7039 | likely_pathogenic | 0.7752 | pathogenic | -0.072 | Destabilizing | 0.726 | D | 0.464 | neutral | None | None | None | None | N |
E/G | 0.229 | likely_benign | 0.2812 | benign | -0.166 | Destabilizing | 0.22 | N | 0.379 | neutral | D | 0.553226759 | None | None | N |
E/H | 0.476 | ambiguous | 0.509 | ambiguous | 0.406 | Stabilizing | 0.909 | D | 0.305 | neutral | None | None | None | None | N |
E/I | 0.3309 | likely_benign | 0.406 | ambiguous | 0.204 | Stabilizing | 0.396 | N | 0.412 | neutral | None | None | None | None | N |
E/K | 0.1601 | likely_benign | 0.1845 | benign | 0.535 | Stabilizing | 0.22 | N | 0.339 | neutral | N | 0.510270083 | None | None | N |
E/L | 0.4499 | ambiguous | 0.5197 | ambiguous | 0.204 | Stabilizing | 0.157 | N | 0.436 | neutral | None | None | None | None | N |
E/M | 0.4691 | ambiguous | 0.5441 | ambiguous | 0.089 | Stabilizing | 0.909 | D | 0.431 | neutral | None | None | None | None | N |
E/N | 0.2779 | likely_benign | 0.3343 | benign | 0.24 | Stabilizing | 0.396 | N | 0.287 | neutral | None | None | None | None | N |
E/P | 0.8104 | likely_pathogenic | 0.8734 | pathogenic | 0.138 | Stabilizing | 0.726 | D | 0.33 | neutral | None | None | None | None | N |
E/Q | 0.1651 | likely_benign | 0.1721 | benign | 0.264 | Stabilizing | 0.497 | N | 0.327 | neutral | N | 0.514099582 | None | None | N |
E/R | 0.2578 | likely_benign | 0.2935 | benign | 0.675 | Stabilizing | 0.567 | D | 0.313 | neutral | None | None | None | None | N |
E/S | 0.2178 | likely_benign | 0.2441 | benign | 0.133 | Stabilizing | 0.157 | N | 0.323 | neutral | None | None | None | None | N |
E/T | 0.2398 | likely_benign | 0.2835 | benign | 0.242 | Stabilizing | 0.272 | N | 0.344 | neutral | None | None | None | None | N |
E/V | 0.1965 | likely_benign | 0.2347 | benign | 0.138 | Stabilizing | 0.009 | N | 0.261 | neutral | N | 0.51692493 | None | None | N |
E/W | 0.8775 | likely_pathogenic | 0.9149 | pathogenic | -0.018 | Destabilizing | 0.968 | D | 0.583 | neutral | None | None | None | None | N |
E/Y | 0.6189 | likely_pathogenic | 0.7015 | pathogenic | 0.151 | Stabilizing | 0.89 | D | 0.431 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.