Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14818 | 44677;44678;44679 | chr2:178625369;178625368;178625367 | chr2:179490096;179490095;179490094 |
N2AB | 13177 | 39754;39755;39756 | chr2:178625369;178625368;178625367 | chr2:179490096;179490095;179490094 |
N2A | 12250 | 36973;36974;36975 | chr2:178625369;178625368;178625367 | chr2:179490096;179490095;179490094 |
N2B | 5753 | 17482;17483;17484 | chr2:178625369;178625368;178625367 | chr2:179490096;179490095;179490094 |
Novex-1 | 5878 | 17857;17858;17859 | chr2:178625369;178625368;178625367 | chr2:179490096;179490095;179490094 |
Novex-2 | 5945 | 18058;18059;18060 | chr2:178625369;178625368;178625367 | chr2:179490096;179490095;179490094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | None | None | 0.999 | N | 0.614 | 0.443 | 0.28058544554 | gnomAD-4.0.0 | 6.97275E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.68748E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8958 | likely_pathogenic | 0.8833 | pathogenic | -1.745 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
H/C | 0.4407 | ambiguous | 0.4183 | ambiguous | -1.329 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
H/D | 0.9536 | likely_pathogenic | 0.9658 | pathogenic | -1.774 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.627265089 | None | None | N |
H/E | 0.9551 | likely_pathogenic | 0.9628 | pathogenic | -1.572 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
H/F | 0.6863 | likely_pathogenic | 0.6576 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
H/G | 0.9509 | likely_pathogenic | 0.9549 | pathogenic | -2.173 | Highly Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
H/I | 0.8518 | likely_pathogenic | 0.864 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
H/K | 0.8661 | likely_pathogenic | 0.9028 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
H/L | 0.5571 | ambiguous | 0.5648 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.806 | deleterious | D | 0.557286812 | None | None | N |
H/M | 0.8963 | likely_pathogenic | 0.8978 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
H/N | 0.6041 | likely_pathogenic | 0.6508 | pathogenic | -1.897 | Destabilizing | 0.999 | D | 0.595 | neutral | D | 0.587758515 | None | None | N |
H/P | 0.9601 | likely_pathogenic | 0.9805 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.565354002 | None | None | N |
H/Q | 0.745 | likely_pathogenic | 0.75 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.47035073 | None | None | N |
H/R | 0.557 | ambiguous | 0.6329 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.450927833 | None | None | N |
H/S | 0.8369 | likely_pathogenic | 0.832 | pathogenic | -2.083 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
H/T | 0.9131 | likely_pathogenic | 0.9217 | pathogenic | -1.755 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
H/V | 0.8109 | likely_pathogenic | 0.8136 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
H/W | 0.7427 | likely_pathogenic | 0.7384 | pathogenic | 0.628 | Stabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
H/Y | 0.2547 | likely_benign | 0.2531 | benign | 0.479 | Stabilizing | 0.999 | D | 0.614 | neutral | N | 0.442829748 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.