Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1482 | 4669;4670;4671 | chr2:178777740;178777739;178777738 | chr2:179642467;179642466;179642465 |
N2AB | 1482 | 4669;4670;4671 | chr2:178777740;178777739;178777738 | chr2:179642467;179642466;179642465 |
N2A | 1482 | 4669;4670;4671 | chr2:178777740;178777739;178777738 | chr2:179642467;179642466;179642465 |
N2B | 1436 | 4531;4532;4533 | chr2:178777740;178777739;178777738 | chr2:179642467;179642466;179642465 |
Novex-1 | 1436 | 4531;4532;4533 | chr2:178777740;178777739;178777738 | chr2:179642467;179642466;179642465 |
Novex-2 | 1436 | 4531;4532;4533 | chr2:178777740;178777739;178777738 | chr2:179642467;179642466;179642465 |
Novex-3 | 1482 | 4669;4670;4671 | chr2:178777740;178777739;178777738 | chr2:179642467;179642466;179642465 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 0.991 | D | 0.784 | 0.652 | 0.543209242439 | gnomAD-4.0.0 | 3.42052E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49666E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9481 | likely_pathogenic | 0.9443 | pathogenic | -0.666 | Destabilizing | 0.984 | D | 0.685 | prob.neutral | D | 0.630034197 | None | None | I |
G/C | 0.9932 | likely_pathogenic | 0.9931 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | D | 0.771233446 | None | None | I |
G/D | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -1.475 | Destabilizing | 0.315 | N | 0.587 | neutral | D | 0.793295801 | None | None | I |
G/E | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -1.57 | Destabilizing | 0.993 | D | 0.818 | deleterious | None | None | None | None | I |
G/F | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
G/H | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
G/I | 0.9987 | likely_pathogenic | 0.9986 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/K | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.511 | Destabilizing | 0.997 | D | 0.828 | deleterious | None | None | None | None | I |
G/L | 0.9981 | likely_pathogenic | 0.9982 | pathogenic | -0.446 | Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | I |
G/M | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
G/N | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -1.0 | Destabilizing | 0.993 | D | 0.809 | deleterious | None | None | None | None | I |
G/P | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -0.482 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | I |
G/Q | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -1.236 | Destabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | I |
G/R | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -1.08 | Destabilizing | 0.998 | D | 0.804 | deleterious | D | 0.825893571 | None | None | I |
G/S | 0.9675 | likely_pathogenic | 0.9633 | pathogenic | -1.086 | Destabilizing | 0.991 | D | 0.784 | deleterious | D | 0.666609446 | None | None | I |
G/T | 0.9953 | likely_pathogenic | 0.9953 | pathogenic | -1.131 | Destabilizing | 0.997 | D | 0.827 | deleterious | None | None | None | None | I |
G/V | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -0.482 | Destabilizing | 0.998 | D | 0.825 | deleterious | D | 0.756851078 | None | None | I |
G/W | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
G/Y | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.