Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14827 | 44704;44705;44706 | chr2:178625342;178625341;178625340 | chr2:179490069;179490068;179490067 |
N2AB | 13186 | 39781;39782;39783 | chr2:178625342;178625341;178625340 | chr2:179490069;179490068;179490067 |
N2A | 12259 | 37000;37001;37002 | chr2:178625342;178625341;178625340 | chr2:179490069;179490068;179490067 |
N2B | 5762 | 17509;17510;17511 | chr2:178625342;178625341;178625340 | chr2:179490069;179490068;179490067 |
Novex-1 | 5887 | 17884;17885;17886 | chr2:178625342;178625341;178625340 | chr2:179490069;179490068;179490067 |
Novex-2 | 5954 | 18085;18086;18087 | chr2:178625342;178625341;178625340 | chr2:179490069;179490068;179490067 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | N | 0.395 | 0.134 | 0.29527378943 | gnomAD-4.0.0 | 1.62002E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.83624E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2998 | likely_benign | 0.3017 | benign | -0.458 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | I |
L/C | 0.7911 | likely_pathogenic | 0.7664 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
L/D | 0.7775 | likely_pathogenic | 0.7748 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
L/E | 0.3861 | ambiguous | 0.4026 | ambiguous | -0.3 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
L/F | 0.311 | likely_benign | 0.3225 | benign | -0.611 | Destabilizing | 1.0 | D | 0.639 | neutral | D | 0.550097352 | None | None | I |
L/G | 0.6641 | likely_pathogenic | 0.6433 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
L/H | 0.4415 | ambiguous | 0.454 | ambiguous | 0.017 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
L/I | 0.122 | likely_benign | 0.1283 | benign | -0.242 | Destabilizing | 0.999 | D | 0.395 | neutral | N | 0.478053967 | None | None | I |
L/K | 0.278 | likely_benign | 0.3083 | benign | -0.256 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
L/M | 0.1371 | likely_benign | 0.1369 | benign | -0.341 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | I |
L/N | 0.5375 | ambiguous | 0.5449 | ambiguous | -0.03 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
L/P | 0.235 | likely_benign | 0.2274 | benign | -0.282 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
L/Q | 0.2302 | likely_benign | 0.2376 | benign | -0.261 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
L/R | 0.2622 | likely_benign | 0.27 | benign | 0.267 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
L/S | 0.433 | ambiguous | 0.4307 | ambiguous | -0.43 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.434092518 | None | None | I |
L/T | 0.2496 | likely_benign | 0.2562 | benign | -0.43 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
L/V | 0.1332 | likely_benign | 0.137 | benign | -0.282 | Destabilizing | 0.999 | D | 0.44 | neutral | N | 0.439958195 | None | None | I |
L/W | 0.4488 | ambiguous | 0.4291 | ambiguous | -0.642 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
L/Y | 0.589 | likely_pathogenic | 0.5896 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.