Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14832 | 44719;44720;44721 | chr2:178625327;178625326;178625325 | chr2:179490054;179490053;179490052 |
N2AB | 13191 | 39796;39797;39798 | chr2:178625327;178625326;178625325 | chr2:179490054;179490053;179490052 |
N2A | 12264 | 37015;37016;37017 | chr2:178625327;178625326;178625325 | chr2:179490054;179490053;179490052 |
N2B | 5767 | 17524;17525;17526 | chr2:178625327;178625326;178625325 | chr2:179490054;179490053;179490052 |
Novex-1 | 5892 | 17899;17900;17901 | chr2:178625327;178625326;178625325 | chr2:179490054;179490053;179490052 |
Novex-2 | 5959 | 18100;18101;18102 | chr2:178625327;178625326;178625325 | chr2:179490054;179490053;179490052 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1354845947 | None | 0.994 | D | 0.647 | 0.56 | 0.582764979894 | gnomAD-4.0.0 | 1.61298E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46374E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1644 | likely_benign | 0.1567 | benign | -0.409 | Destabilizing | 0.989 | D | 0.591 | neutral | D | 0.55728278 | None | None | N |
E/C | 0.8964 | likely_pathogenic | 0.8821 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/D | 0.1846 | likely_benign | 0.1793 | benign | -1.207 | Destabilizing | 0.217 | N | 0.323 | neutral | N | 0.510093082 | None | None | N |
E/F | 0.7876 | likely_pathogenic | 0.7592 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/G | 0.2747 | likely_benign | 0.2664 | benign | -0.73 | Destabilizing | 0.994 | D | 0.647 | neutral | D | 0.674023997 | None | None | N |
E/H | 0.5668 | likely_pathogenic | 0.521 | ambiguous | -1.003 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
E/I | 0.3218 | likely_benign | 0.3022 | benign | 0.44 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/K | 0.1475 | likely_benign | 0.1407 | benign | -0.7 | Destabilizing | 0.978 | D | 0.527 | neutral | N | 0.506578377 | None | None | N |
E/L | 0.405 | ambiguous | 0.3724 | ambiguous | 0.44 | Stabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
E/M | 0.4263 | ambiguous | 0.4046 | ambiguous | 0.872 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/N | 0.3169 | likely_benign | 0.3093 | benign | -0.891 | Destabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | N |
E/P | 0.5435 | ambiguous | 0.5134 | ambiguous | 0.18 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/Q | 0.156 | likely_benign | 0.1495 | benign | -0.771 | Destabilizing | 0.889 | D | 0.275 | neutral | N | 0.506294339 | None | None | N |
E/R | 0.2882 | likely_benign | 0.2556 | benign | -0.675 | Destabilizing | 0.998 | D | 0.644 | neutral | None | None | None | None | N |
E/S | 0.2624 | likely_benign | 0.2493 | benign | -1.186 | Destabilizing | 0.992 | D | 0.552 | neutral | None | None | None | None | N |
E/T | 0.2386 | likely_benign | 0.2277 | benign | -0.936 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/V | 0.1973 | likely_benign | 0.1849 | benign | 0.18 | Stabilizing | 0.998 | D | 0.753 | deleterious | N | 0.51283326 | None | None | N |
E/W | 0.9293 | likely_pathogenic | 0.9122 | pathogenic | -0.578 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/Y | 0.7178 | likely_pathogenic | 0.6832 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.