Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14835 | 44728;44729;44730 | chr2:178625318;178625317;178625316 | chr2:179490045;179490044;179490043 |
N2AB | 13194 | 39805;39806;39807 | chr2:178625318;178625317;178625316 | chr2:179490045;179490044;179490043 |
N2A | 12267 | 37024;37025;37026 | chr2:178625318;178625317;178625316 | chr2:179490045;179490044;179490043 |
N2B | 5770 | 17533;17534;17535 | chr2:178625318;178625317;178625316 | chr2:179490045;179490044;179490043 |
Novex-1 | 5895 | 17908;17909;17910 | chr2:178625318;178625317;178625316 | chr2:179490045;179490044;179490043 |
Novex-2 | 5962 | 18109;18110;18111 | chr2:178625318;178625317;178625316 | chr2:179490045;179490044;179490043 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.884 | N | 0.375 | 0.093 | 0.188950314367 | gnomAD-4.0.0 | 1.3741E-06 | None | None | None | None | N | None | 3.03306E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66384E-05 |
L/Q | rs1559907686 | None | 1.0 | N | 0.929 | 0.44 | 0.696656391576 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 1.26711E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8371 | likely_pathogenic | 0.8574 | pathogenic | -2.764 | Highly Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | N |
L/C | 0.6996 | likely_pathogenic | 0.7002 | pathogenic | -1.775 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/D | 0.9982 | likely_pathogenic | 0.999 | pathogenic | -3.504 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/E | 0.989 | likely_pathogenic | 0.9929 | pathogenic | -3.196 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
L/F | 0.4678 | ambiguous | 0.606 | pathogenic | -1.675 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/G | 0.9676 | likely_pathogenic | 0.9735 | pathogenic | -3.344 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/H | 0.9678 | likely_pathogenic | 0.9826 | pathogenic | -3.027 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
L/I | 0.1515 | likely_benign | 0.1883 | benign | -1.017 | Destabilizing | 0.884 | D | 0.375 | neutral | N | 0.447263231 | None | None | N |
L/K | 0.9801 | likely_pathogenic | 0.9863 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/M | 0.2277 | likely_benign | 0.2854 | benign | -1.082 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/N | 0.9868 | likely_pathogenic | 0.9908 | pathogenic | -2.775 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/P | 0.9925 | likely_pathogenic | 0.9964 | pathogenic | -1.591 | Destabilizing | 1.0 | D | 0.925 | deleterious | N | 0.47619935 | None | None | N |
L/Q | 0.9528 | likely_pathogenic | 0.9677 | pathogenic | -2.461 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | N | 0.47619935 | None | None | N |
L/R | 0.9585 | likely_pathogenic | 0.9695 | pathogenic | -2.077 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | N | 0.47619935 | None | None | N |
L/S | 0.9796 | likely_pathogenic | 0.9862 | pathogenic | -3.295 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
L/T | 0.9232 | likely_pathogenic | 0.9433 | pathogenic | -2.838 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/V | 0.1592 | likely_benign | 0.1785 | benign | -1.591 | Destabilizing | 0.981 | D | 0.675 | prob.neutral | N | 0.43484045 | None | None | N |
L/W | 0.9172 | likely_pathogenic | 0.9514 | pathogenic | -2.132 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/Y | 0.9079 | likely_pathogenic | 0.9448 | pathogenic | -1.899 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.