Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14845 | 44758;44759;44760 | chr2:178625288;178625287;178625286 | chr2:179490015;179490014;179490013 |
N2AB | 13204 | 39835;39836;39837 | chr2:178625288;178625287;178625286 | chr2:179490015;179490014;179490013 |
N2A | 12277 | 37054;37055;37056 | chr2:178625288;178625287;178625286 | chr2:179490015;179490014;179490013 |
N2B | 5780 | 17563;17564;17565 | chr2:178625288;178625287;178625286 | chr2:179490015;179490014;179490013 |
Novex-1 | 5905 | 17938;17939;17940 | chr2:178625288;178625287;178625286 | chr2:179490015;179490014;179490013 |
Novex-2 | 5972 | 18139;18140;18141 | chr2:178625288;178625287;178625286 | chr2:179490015;179490014;179490013 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.303 | N | 0.445 | 0.118 | 0.0666544352282 | gnomAD-4.0.0 | 6.8765E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.17503E-05 | 0 |
N/S | None | None | 0.002 | N | 0.145 | 0.101 | 0.0401082797425 | gnomAD-4.0.0 | 3.22103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61388E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2265 | likely_benign | 0.1749 | benign | -0.809 | Destabilizing | 0.016 | N | 0.408 | neutral | None | None | None | None | N |
N/C | 0.3263 | likely_benign | 0.2445 | benign | 0.101 | Stabilizing | 0.869 | D | 0.532 | neutral | None | None | None | None | N |
N/D | 0.2026 | likely_benign | 0.1637 | benign | -0.296 | Destabilizing | 0.025 | N | 0.338 | neutral | N | 0.331526442 | None | None | N |
N/E | 0.3302 | likely_benign | 0.2624 | benign | -0.251 | Destabilizing | 0.016 | N | 0.329 | neutral | None | None | None | None | N |
N/F | 0.4769 | ambiguous | 0.3804 | ambiguous | -0.768 | Destabilizing | 0.637 | D | 0.541 | neutral | None | None | None | None | N |
N/G | 0.3852 | ambiguous | 0.3041 | benign | -1.099 | Destabilizing | 0.032 | N | 0.319 | neutral | None | None | None | None | N |
N/H | 0.0838 | likely_benign | 0.0659 | benign | -0.925 | Destabilizing | 0.303 | N | 0.445 | neutral | N | 0.345569488 | None | None | N |
N/I | 0.18 | likely_benign | 0.1511 | benign | -0.098 | Destabilizing | 0.303 | N | 0.562 | neutral | N | 0.334209355 | None | None | N |
N/K | 0.1414 | likely_benign | 0.116 | benign | -0.195 | Destabilizing | None | N | 0.141 | neutral | N | 0.344705782 | None | None | N |
N/L | 0.1794 | likely_benign | 0.1463 | benign | -0.098 | Destabilizing | 0.075 | N | 0.479 | neutral | None | None | None | None | N |
N/M | 0.2667 | likely_benign | 0.2222 | benign | 0.399 | Stabilizing | 0.637 | D | 0.531 | neutral | None | None | None | None | N |
N/P | 0.7693 | likely_pathogenic | 0.7255 | pathogenic | -0.306 | Destabilizing | 0.366 | N | 0.534 | neutral | None | None | None | None | N |
N/Q | 0.2211 | likely_benign | 0.172 | benign | -0.785 | Destabilizing | 0.003 | N | 0.197 | neutral | None | None | None | None | N |
N/R | 0.1818 | likely_benign | 0.1344 | benign | -0.15 | Destabilizing | 0.039 | N | 0.319 | neutral | None | None | None | None | N |
N/S | 0.0856 | likely_benign | 0.0777 | benign | -0.697 | Destabilizing | 0.002 | N | 0.145 | neutral | N | 0.34373754 | None | None | N |
N/T | 0.1121 | likely_benign | 0.0963 | benign | -0.47 | Destabilizing | 0.03 | N | 0.327 | neutral | N | 0.34852312 | None | None | N |
N/V | 0.1804 | likely_benign | 0.1444 | benign | -0.306 | Destabilizing | 0.075 | N | 0.528 | neutral | None | None | None | None | N |
N/W | 0.7527 | likely_pathogenic | 0.6321 | pathogenic | -0.556 | Destabilizing | 0.869 | D | 0.581 | neutral | None | None | None | None | N |
N/Y | 0.1464 | likely_benign | 0.1151 | benign | -0.361 | Destabilizing | 0.303 | N | 0.543 | neutral | N | 0.327097007 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.