Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14856 | 44791;44792;44793 | chr2:178624714;178624713;178624712 | chr2:179489441;179489440;179489439 |
N2AB | 13215 | 39868;39869;39870 | chr2:178624714;178624713;178624712 | chr2:179489441;179489440;179489439 |
N2A | 12288 | 37087;37088;37089 | chr2:178624714;178624713;178624712 | chr2:179489441;179489440;179489439 |
N2B | 5791 | 17596;17597;17598 | chr2:178624714;178624713;178624712 | chr2:179489441;179489440;179489439 |
Novex-1 | 5916 | 17971;17972;17973 | chr2:178624714;178624713;178624712 | chr2:179489441;179489440;179489439 |
Novex-2 | 5983 | 18172;18173;18174 | chr2:178624714;178624713;178624712 | chr2:179489441;179489440;179489439 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.905 | N | 0.294 | 0.185 | 0.345859378078 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1668 | likely_benign | 0.2097 | benign | -0.787 | Destabilizing | 0.981 | D | 0.466 | neutral | D | 0.538309346 | None | None | N |
T/C | 0.6742 | likely_pathogenic | 0.7459 | pathogenic | -0.507 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/D | 0.6891 | likely_pathogenic | 0.7485 | pathogenic | -0.08 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/E | 0.5106 | ambiguous | 0.5613 | ambiguous | -0.074 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/F | 0.4975 | ambiguous | 0.5866 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/G | 0.4524 | ambiguous | 0.5225 | ambiguous | -1.053 | Destabilizing | 0.997 | D | 0.625 | neutral | None | None | None | None | N |
T/H | 0.4644 | ambiguous | 0.5571 | ambiguous | -1.252 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/I | 0.2907 | likely_benign | 0.3581 | ambiguous | -0.169 | Destabilizing | 0.999 | D | 0.745 | deleterious | N | 0.513545963 | None | None | N |
T/K | 0.3607 | ambiguous | 0.4158 | ambiguous | -0.697 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/L | 0.1476 | likely_benign | 0.1931 | benign | -0.169 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | N |
T/M | 0.1738 | likely_benign | 0.2081 | benign | 0.048 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/N | 0.2824 | likely_benign | 0.3439 | ambiguous | -0.635 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | D | 0.598063258 | None | None | N |
T/P | 0.4889 | ambiguous | 0.5204 | ambiguous | -0.342 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.63187176 | None | None | N |
T/Q | 0.3555 | ambiguous | 0.4219 | ambiguous | -0.781 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/R | 0.2799 | likely_benign | 0.3348 | benign | -0.456 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
T/S | 0.1612 | likely_benign | 0.2007 | benign | -0.95 | Destabilizing | 0.905 | D | 0.294 | neutral | N | 0.507396605 | None | None | N |
T/V | 0.2439 | likely_benign | 0.2827 | benign | -0.342 | Destabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | N |
T/W | 0.8117 | likely_pathogenic | 0.8601 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
T/Y | 0.5855 | likely_pathogenic | 0.6644 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.