Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14867 | 44824;44825;44826 | chr2:178624681;178624680;178624679 | chr2:179489408;179489407;179489406 |
N2AB | 13226 | 39901;39902;39903 | chr2:178624681;178624680;178624679 | chr2:179489408;179489407;179489406 |
N2A | 12299 | 37120;37121;37122 | chr2:178624681;178624680;178624679 | chr2:179489408;179489407;179489406 |
N2B | 5802 | 17629;17630;17631 | chr2:178624681;178624680;178624679 | chr2:179489408;179489407;179489406 |
Novex-1 | 5927 | 18004;18005;18006 | chr2:178624681;178624680;178624679 | chr2:179489408;179489407;179489406 |
Novex-2 | 5994 | 18205;18206;18207 | chr2:178624681;178624680;178624679 | chr2:179489408;179489407;179489406 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs1317888739 | -0.244 | 0.027 | D | 0.373 | 0.419 | 0.393623145366 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
G/A | rs1317888739 | -0.244 | 0.027 | D | 0.373 | 0.419 | 0.393623145366 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/A | rs1317888739 | -0.244 | 0.027 | D | 0.373 | 0.419 | 0.393623145366 | gnomAD-4.0.0 | 6.58207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47232E-05 | 0 | 0 |
G/E | rs1317888739 | None | None | D | 0.241 | 0.355 | 0.535679682109 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
G/R | rs144848584 | -0.316 | 0.062 | D | 0.522 | 0.426 | 0.74873181118 | gnomAD-2.1.1 | 1.41208E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.91205E-03 | None | 0 | None | 0 | 0 | 1.66445E-04 |
G/R | rs144848584 | -0.316 | 0.062 | D | 0.522 | 0.426 | 0.74873181118 | gnomAD-3.1.2 | 7.24E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 2.13841E-03 | None | 0 | 0 | 0 | 0 | 0 |
G/R | rs144848584 | -0.316 | 0.062 | D | 0.522 | 0.426 | 0.74873181118 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
G/R | rs144848584 | -0.316 | 0.062 | D | 0.522 | 0.426 | 0.74873181118 | gnomAD-4.0.0 | 1.28999E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.56826E-03 | None | 0 | 0 | 8.48151E-07 | 0 | 4.80831E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1637 | likely_benign | 0.1482 | benign | -0.358 | Destabilizing | 0.027 | N | 0.373 | neutral | D | 0.586968316 | None | None | N |
G/C | 0.4353 | ambiguous | 0.4143 | ambiguous | -0.868 | Destabilizing | 0.935 | D | 0.629 | neutral | None | None | None | None | N |
G/D | 0.2123 | likely_benign | 0.1994 | benign | -0.681 | Destabilizing | 0.016 | N | 0.43 | neutral | None | None | None | None | N |
G/E | 0.1025 | likely_benign | 0.0885 | benign | -0.851 | Destabilizing | None | N | 0.241 | neutral | D | 0.543324697 | None | None | N |
G/F | 0.595 | likely_pathogenic | 0.6015 | pathogenic | -1.16 | Destabilizing | 0.791 | D | 0.639 | neutral | None | None | None | None | N |
G/H | 0.399 | ambiguous | 0.3893 | ambiguous | -0.585 | Destabilizing | 0.555 | D | 0.609 | neutral | None | None | None | None | N |
G/I | 0.4853 | ambiguous | 0.41 | ambiguous | -0.513 | Destabilizing | 0.555 | D | 0.628 | neutral | None | None | None | None | N |
G/K | 0.2663 | likely_benign | 0.2322 | benign | -0.746 | Destabilizing | 0.035 | N | 0.47 | neutral | None | None | None | None | N |
G/L | 0.4189 | ambiguous | 0.4129 | ambiguous | -0.513 | Destabilizing | 0.149 | N | 0.582 | neutral | None | None | None | None | N |
G/M | 0.4233 | ambiguous | 0.396 | ambiguous | -0.395 | Destabilizing | 0.935 | D | 0.629 | neutral | None | None | None | None | N |
G/N | 0.2576 | likely_benign | 0.2526 | benign | -0.414 | Destabilizing | 0.149 | N | 0.341 | neutral | None | None | None | None | N |
G/P | 0.9341 | likely_pathogenic | 0.9233 | pathogenic | -0.429 | Destabilizing | 0.262 | N | 0.572 | neutral | None | None | None | None | N |
G/Q | 0.2286 | likely_benign | 0.2145 | benign | -0.746 | Destabilizing | 0.081 | N | 0.474 | neutral | None | None | None | None | N |
G/R | 0.2415 | likely_benign | 0.2076 | benign | -0.277 | Destabilizing | 0.062 | N | 0.522 | neutral | D | 0.540260232 | None | None | N |
G/S | 0.1727 | likely_benign | 0.161 | benign | -0.558 | Destabilizing | 0.035 | N | 0.384 | neutral | None | None | None | None | N |
G/T | 0.2046 | likely_benign | 0.1864 | benign | -0.663 | Destabilizing | 0.149 | N | 0.503 | neutral | None | None | None | None | N |
G/V | 0.3494 | ambiguous | 0.2798 | benign | -0.429 | Destabilizing | 0.117 | N | 0.551 | neutral | D | 0.686391947 | None | None | N |
G/W | 0.4883 | ambiguous | 0.4324 | ambiguous | -1.28 | Destabilizing | 0.935 | D | 0.607 | neutral | None | None | None | None | N |
G/Y | 0.4667 | ambiguous | 0.447 | ambiguous | -0.929 | Destabilizing | 0.791 | D | 0.634 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.