Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14869 | 44830;44831;44832 | chr2:178624675;178624674;178624673 | chr2:179489402;179489401;179489400 |
N2AB | 13228 | 39907;39908;39909 | chr2:178624675;178624674;178624673 | chr2:179489402;179489401;179489400 |
N2A | 12301 | 37126;37127;37128 | chr2:178624675;178624674;178624673 | chr2:179489402;179489401;179489400 |
N2B | 5804 | 17635;17636;17637 | chr2:178624675;178624674;178624673 | chr2:179489402;179489401;179489400 |
Novex-1 | 5929 | 18010;18011;18012 | chr2:178624675;178624674;178624673 | chr2:179489402;179489401;179489400 |
Novex-2 | 5996 | 18211;18212;18213 | chr2:178624675;178624674;178624673 | chr2:179489402;179489401;179489400 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.958 | N | 0.359 | 0.236 | 0.256793551483 | gnomAD-4.0.0 | 1.20036E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31254E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1022 | likely_benign | 0.1029 | benign | -0.624 | Destabilizing | 0.958 | D | 0.376 | neutral | N | 0.508205632 | None | None | N |
T/C | 0.6579 | likely_pathogenic | 0.6834 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/D | 0.3927 | ambiguous | 0.4454 | ambiguous | -0.173 | Destabilizing | 0.086 | N | 0.31 | neutral | None | None | None | None | N |
T/E | 0.334 | likely_benign | 0.3415 | ambiguous | -0.198 | Destabilizing | 0.938 | D | 0.552 | neutral | None | None | None | None | N |
T/F | 0.3824 | ambiguous | 0.4067 | ambiguous | -0.756 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
T/G | 0.3541 | ambiguous | 0.4026 | ambiguous | -0.856 | Destabilizing | 0.968 | D | 0.619 | neutral | None | None | None | None | N |
T/H | 0.3876 | ambiguous | 0.4268 | ambiguous | -1.086 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
T/I | 0.28 | likely_benign | 0.2618 | benign | -0.104 | Destabilizing | 0.994 | D | 0.752 | deleterious | D | 0.607540268 | None | None | N |
T/K | 0.2258 | likely_benign | 0.2244 | benign | -0.683 | Destabilizing | 0.991 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/L | 0.1563 | likely_benign | 0.1591 | benign | -0.104 | Destabilizing | 0.984 | D | 0.604 | neutral | None | None | None | None | N |
T/M | 0.1341 | likely_benign | 0.1198 | benign | 0.17 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
T/N | 0.1683 | likely_benign | 0.1889 | benign | -0.464 | Destabilizing | 0.976 | D | 0.594 | neutral | N | 0.516305953 | None | None | N |
T/P | 0.1674 | likely_benign | 0.1735 | benign | -0.246 | Destabilizing | 0.994 | D | 0.746 | deleterious | N | 0.516766627 | None | None | N |
T/Q | 0.2918 | likely_benign | 0.3095 | benign | -0.636 | Destabilizing | 0.995 | D | 0.747 | deleterious | None | None | None | None | N |
T/R | 0.1863 | likely_benign | 0.1884 | benign | -0.385 | Destabilizing | 0.995 | D | 0.745 | deleterious | None | None | None | None | N |
T/S | 0.1337 | likely_benign | 0.1504 | benign | -0.697 | Destabilizing | 0.958 | D | 0.359 | neutral | N | 0.467777208 | None | None | N |
T/V | 0.1938 | likely_benign | 0.1888 | benign | -0.246 | Destabilizing | 0.984 | D | 0.503 | neutral | None | None | None | None | N |
T/W | 0.738 | likely_pathogenic | 0.7628 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
T/Y | 0.4545 | ambiguous | 0.4883 | ambiguous | -0.519 | Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.