Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14872 | 44839;44840;44841 | chr2:178624666;178624665;178624664 | chr2:179489393;179489392;179489391 |
N2AB | 13231 | 39916;39917;39918 | chr2:178624666;178624665;178624664 | chr2:179489393;179489392;179489391 |
N2A | 12304 | 37135;37136;37137 | chr2:178624666;178624665;178624664 | chr2:179489393;179489392;179489391 |
N2B | 5807 | 17644;17645;17646 | chr2:178624666;178624665;178624664 | chr2:179489393;179489392;179489391 |
Novex-1 | 5932 | 18019;18020;18021 | chr2:178624666;178624665;178624664 | chr2:179489393;179489392;179489391 |
Novex-2 | 5999 | 18220;18221;18222 | chr2:178624666;178624665;178624664 | chr2:179489393;179489392;179489391 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.983 | D | 0.699 | 0.454 | 0.487983534966 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9516 | likely_pathogenic | 0.9535 | pathogenic | -2.824 | Highly Destabilizing | 0.916 | D | 0.746 | deleterious | None | None | None | None | N |
L/C | 0.9562 | likely_pathogenic | 0.9545 | pathogenic | -1.964 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -3.581 | Highly Destabilizing | 0.996 | D | 0.891 | deleterious | None | None | None | None | N |
L/E | 0.9945 | likely_pathogenic | 0.9937 | pathogenic | -3.289 | Highly Destabilizing | 0.996 | D | 0.888 | deleterious | None | None | None | None | N |
L/F | 0.3128 | likely_benign | 0.2767 | benign | -1.745 | Destabilizing | 0.033 | N | 0.33 | neutral | None | None | None | None | N |
L/G | 0.9909 | likely_pathogenic | 0.9903 | pathogenic | -3.394 | Highly Destabilizing | 0.987 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.9779 | likely_pathogenic | 0.974 | pathogenic | -2.925 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
L/I | 0.3776 | ambiguous | 0.3709 | ambiguous | -1.119 | Destabilizing | 0.845 | D | 0.595 | neutral | None | None | None | None | N |
L/K | 0.9859 | likely_pathogenic | 0.9835 | pathogenic | -2.319 | Highly Destabilizing | 0.987 | D | 0.893 | deleterious | None | None | None | None | N |
L/M | 0.2898 | likely_benign | 0.2714 | benign | -1.081 | Destabilizing | 0.983 | D | 0.699 | prob.neutral | D | 0.597389278 | None | None | N |
L/N | 0.9961 | likely_pathogenic | 0.9956 | pathogenic | -2.904 | Highly Destabilizing | 0.996 | D | 0.894 | deleterious | None | None | None | None | N |
L/P | 0.9962 | likely_pathogenic | 0.995 | pathogenic | -1.677 | Destabilizing | 0.994 | D | 0.894 | deleterious | D | 0.787455929 | None | None | N |
L/Q | 0.9738 | likely_pathogenic | 0.9697 | pathogenic | -2.661 | Highly Destabilizing | 0.994 | D | 0.899 | deleterious | D | 0.787455929 | None | None | N |
L/R | 0.9729 | likely_pathogenic | 0.9682 | pathogenic | -2.172 | Highly Destabilizing | 0.994 | D | 0.889 | deleterious | D | 0.787455929 | None | None | N |
L/S | 0.9921 | likely_pathogenic | 0.9914 | pathogenic | -3.489 | Highly Destabilizing | 0.987 | D | 0.887 | deleterious | None | None | None | None | N |
L/T | 0.971 | likely_pathogenic | 0.9715 | pathogenic | -3.047 | Highly Destabilizing | 0.987 | D | 0.823 | deleterious | None | None | None | None | N |
L/V | 0.5077 | ambiguous | 0.5044 | ambiguous | -1.677 | Destabilizing | 0.892 | D | 0.621 | neutral | D | 0.641474077 | None | None | N |
L/W | 0.8856 | likely_pathogenic | 0.8464 | pathogenic | -2.184 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
L/Y | 0.9257 | likely_pathogenic | 0.9146 | pathogenic | -1.924 | Destabilizing | 0.95 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.