Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14873 | 44842;44843;44844 | chr2:178624663;178624662;178624661 | chr2:179489390;179489389;179489388 |
N2AB | 13232 | 39919;39920;39921 | chr2:178624663;178624662;178624661 | chr2:179489390;179489389;179489388 |
N2A | 12305 | 37138;37139;37140 | chr2:178624663;178624662;178624661 | chr2:179489390;179489389;179489388 |
N2B | 5808 | 17647;17648;17649 | chr2:178624663;178624662;178624661 | chr2:179489390;179489389;179489388 |
Novex-1 | 5933 | 18022;18023;18024 | chr2:178624663;178624662;178624661 | chr2:179489390;179489389;179489388 |
Novex-2 | 6000 | 18223;18224;18225 | chr2:178624663;178624662;178624661 | chr2:179489390;179489389;179489388 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.919 | D | 0.591 | 0.496 | None | gnomAD-4.0.0 | 1.59391E-06 | None | None | None | None | N | None | 5.67537E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2654 | likely_benign | 0.2666 | benign | -0.765 | Destabilizing | 0.919 | D | 0.591 | neutral | D | 0.599327764 | None | None | N |
E/C | 0.9343 | likely_pathogenic | 0.9392 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/D | 0.5907 | likely_pathogenic | 0.5708 | pathogenic | -1.082 | Destabilizing | 0.958 | D | 0.515 | neutral | D | 0.549173317 | None | None | N |
E/F | 0.903 | likely_pathogenic | 0.9055 | pathogenic | -0.133 | Destabilizing | 0.995 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/G | 0.4553 | ambiguous | 0.4323 | ambiguous | -1.131 | Destabilizing | 0.988 | D | 0.667 | neutral | D | 0.70097365 | None | None | N |
E/H | 0.7953 | likely_pathogenic | 0.7981 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
E/I | 0.5716 | likely_pathogenic | 0.5601 | ambiguous | 0.233 | Stabilizing | 0.991 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/K | 0.4975 | ambiguous | 0.4919 | ambiguous | -0.593 | Destabilizing | 0.958 | D | 0.554 | neutral | D | 0.5417718 | None | None | N |
E/L | 0.689 | likely_pathogenic | 0.6839 | pathogenic | 0.233 | Stabilizing | 0.982 | D | 0.674 | neutral | None | None | None | None | N |
E/M | 0.6857 | likely_pathogenic | 0.6819 | pathogenic | 0.56 | Stabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/N | 0.6959 | likely_pathogenic | 0.6609 | pathogenic | -1.108 | Destabilizing | 0.991 | D | 0.656 | neutral | None | None | None | None | N |
E/P | 0.9801 | likely_pathogenic | 0.975 | pathogenic | -0.078 | Destabilizing | 0.995 | D | 0.743 | deleterious | None | None | None | None | N |
E/Q | 0.2359 | likely_benign | 0.2375 | benign | -0.964 | Destabilizing | 0.994 | D | 0.644 | neutral | D | 0.546945021 | None | None | N |
E/R | 0.6233 | likely_pathogenic | 0.6476 | pathogenic | -0.25 | Destabilizing | 0.991 | D | 0.67 | neutral | None | None | None | None | N |
E/S | 0.3698 | ambiguous | 0.3579 | ambiguous | -1.391 | Destabilizing | 0.938 | D | 0.548 | neutral | None | None | None | None | N |
E/T | 0.3127 | likely_benign | 0.3131 | benign | -1.09 | Destabilizing | 0.086 | N | 0.387 | neutral | None | None | None | None | N |
E/V | 0.3441 | ambiguous | 0.3352 | benign | -0.078 | Destabilizing | 0.976 | D | 0.665 | neutral | D | 0.577728785 | None | None | N |
E/W | 0.976 | likely_pathogenic | 0.9797 | pathogenic | 0.121 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/Y | 0.8913 | likely_pathogenic | 0.8948 | pathogenic | 0.117 | Stabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.