Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14876 | 44851;44852;44853 | chr2:178624654;178624653;178624652 | chr2:179489381;179489380;179489379 |
N2AB | 13235 | 39928;39929;39930 | chr2:178624654;178624653;178624652 | chr2:179489381;179489380;179489379 |
N2A | 12308 | 37147;37148;37149 | chr2:178624654;178624653;178624652 | chr2:179489381;179489380;179489379 |
N2B | 5811 | 17656;17657;17658 | chr2:178624654;178624653;178624652 | chr2:179489381;179489380;179489379 |
Novex-1 | 5936 | 18031;18032;18033 | chr2:178624654;178624653;178624652 | chr2:179489381;179489380;179489379 |
Novex-2 | 6003 | 18232;18233;18234 | chr2:178624654;178624653;178624652 | chr2:179489381;179489380;179489379 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.983 | D | 0.845 | 0.71 | 0.933483574898 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8638 | likely_pathogenic | 0.8745 | pathogenic | -2.266 | Highly Destabilizing | 0.892 | D | 0.625 | neutral | D | 0.533128328 | None | None | N |
V/C | 0.981 | likely_pathogenic | 0.9807 | pathogenic | -2.302 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.9833 | likely_pathogenic | 0.9871 | pathogenic | -3.231 | Highly Destabilizing | 0.994 | D | 0.842 | deleterious | D | 0.753626676 | None | None | N |
V/E | 0.9766 | likely_pathogenic | 0.9771 | pathogenic | -3.076 | Highly Destabilizing | 0.987 | D | 0.82 | deleterious | None | None | None | None | N |
V/F | 0.8556 | likely_pathogenic | 0.8174 | pathogenic | -1.384 | Destabilizing | 0.967 | D | 0.796 | deleterious | D | 0.648341842 | None | None | N |
V/G | 0.8129 | likely_pathogenic | 0.8366 | pathogenic | -2.715 | Highly Destabilizing | 0.983 | D | 0.845 | deleterious | D | 0.73227802 | None | None | N |
V/H | 0.9958 | likely_pathogenic | 0.9953 | pathogenic | -2.133 | Highly Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
V/I | 0.1631 | likely_benign | 0.1609 | benign | -1.029 | Destabilizing | 0.099 | N | 0.303 | neutral | N | 0.519202001 | None | None | N |
V/K | 0.9876 | likely_pathogenic | 0.988 | pathogenic | -1.902 | Destabilizing | 0.987 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.565 | likely_pathogenic | 0.5486 | ambiguous | -1.029 | Destabilizing | 0.025 | N | 0.345 | neutral | N | 0.510107023 | None | None | N |
V/M | 0.7577 | likely_pathogenic | 0.7225 | pathogenic | -1.293 | Destabilizing | 0.975 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/N | 0.9644 | likely_pathogenic | 0.9689 | pathogenic | -2.216 | Highly Destabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
V/P | 0.9867 | likely_pathogenic | 0.9892 | pathogenic | -1.416 | Destabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
V/Q | 0.9874 | likely_pathogenic | 0.9874 | pathogenic | -2.206 | Highly Destabilizing | 0.996 | D | 0.822 | deleterious | None | None | None | None | N |
V/R | 0.9822 | likely_pathogenic | 0.982 | pathogenic | -1.522 | Destabilizing | 0.987 | D | 0.847 | deleterious | None | None | None | None | N |
V/S | 0.9455 | likely_pathogenic | 0.9505 | pathogenic | -2.773 | Highly Destabilizing | 0.987 | D | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.7555 | likely_pathogenic | 0.7796 | pathogenic | -2.494 | Highly Destabilizing | 0.916 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/W | 0.9979 | likely_pathogenic | 0.9973 | pathogenic | -1.758 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
V/Y | 0.9826 | likely_pathogenic | 0.9787 | pathogenic | -1.492 | Destabilizing | 0.987 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.