Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14880 | 44863;44864;44865 | chr2:178624642;178624641;178624640 | chr2:179489369;179489368;179489367 |
N2AB | 13239 | 39940;39941;39942 | chr2:178624642;178624641;178624640 | chr2:179489369;179489368;179489367 |
N2A | 12312 | 37159;37160;37161 | chr2:178624642;178624641;178624640 | chr2:179489369;179489368;179489367 |
N2B | 5815 | 17668;17669;17670 | chr2:178624642;178624641;178624640 | chr2:179489369;179489368;179489367 |
Novex-1 | 5940 | 18043;18044;18045 | chr2:178624642;178624641;178624640 | chr2:179489369;179489368;179489367 |
Novex-2 | 6007 | 18244;18245;18246 | chr2:178624642;178624641;178624640 | chr2:179489369;179489368;179489367 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs747496717 | 0.283 | 0.822 | N | 0.551 | 0.201 | 0.236278675362 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66168E-04 |
N/S | rs747496717 | 0.283 | 0.822 | N | 0.551 | 0.201 | 0.236278675362 | gnomAD-4.0.0 | 1.59382E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41896E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4888 | ambiguous | 0.4401 | ambiguous | -0.112 | Destabilizing | 0.754 | D | 0.62 | neutral | None | None | None | None | N |
N/C | 0.7838 | likely_pathogenic | 0.7535 | pathogenic | 0.264 | Stabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
N/D | 0.2021 | likely_benign | 0.1705 | benign | 0.132 | Stabilizing | 0.822 | D | 0.558 | neutral | N | 0.481511927 | None | None | N |
N/E | 0.5306 | ambiguous | 0.4817 | ambiguous | 0.076 | Stabilizing | 0.86 | D | 0.548 | neutral | None | None | None | None | N |
N/F | 0.7721 | likely_pathogenic | 0.7266 | pathogenic | -0.648 | Destabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | N |
N/G | 0.4676 | ambiguous | 0.4283 | ambiguous | -0.229 | Destabilizing | 0.019 | N | 0.273 | neutral | None | None | None | None | N |
N/H | 0.2389 | likely_benign | 0.2167 | benign | -0.26 | Destabilizing | 0.99 | D | 0.535 | neutral | D | 0.550424452 | None | None | N |
N/I | 0.5954 | likely_pathogenic | 0.499 | ambiguous | 0.098 | Stabilizing | 0.99 | D | 0.676 | prob.neutral | N | 0.502632639 | None | None | N |
N/K | 0.4076 | ambiguous | 0.3673 | ambiguous | 0.141 | Stabilizing | 0.058 | N | 0.325 | neutral | N | 0.48369311 | None | None | N |
N/L | 0.5104 | ambiguous | 0.4655 | ambiguous | 0.098 | Stabilizing | 0.978 | D | 0.641 | neutral | None | None | None | None | N |
N/M | 0.5416 | ambiguous | 0.496 | ambiguous | 0.21 | Stabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
N/P | 0.889 | likely_pathogenic | 0.8299 | pathogenic | 0.053 | Stabilizing | 0.993 | D | 0.665 | neutral | None | None | None | None | N |
N/Q | 0.5388 | ambiguous | 0.5129 | ambiguous | -0.206 | Destabilizing | 0.956 | D | 0.537 | neutral | None | None | None | None | N |
N/R | 0.6088 | likely_pathogenic | 0.5566 | ambiguous | 0.199 | Stabilizing | 0.915 | D | 0.513 | neutral | None | None | None | None | N |
N/S | 0.2221 | likely_benign | 0.1943 | benign | 0.02 | Stabilizing | 0.822 | D | 0.551 | neutral | N | 0.476477603 | None | None | N |
N/T | 0.2877 | likely_benign | 0.2408 | benign | 0.084 | Stabilizing | 0.904 | D | 0.528 | neutral | N | 0.497345096 | None | None | N |
N/V | 0.591 | likely_pathogenic | 0.5134 | ambiguous | 0.053 | Stabilizing | 0.978 | D | 0.674 | neutral | None | None | None | None | N |
N/W | 0.9298 | likely_pathogenic | 0.9035 | pathogenic | -0.748 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/Y | 0.3228 | likely_benign | 0.2795 | benign | -0.432 | Destabilizing | 0.99 | D | 0.662 | neutral | D | 0.536602571 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.