Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14890 | 44893;44894;44895 | chr2:178624612;178624611;178624610 | chr2:179489339;179489338;179489337 |
N2AB | 13249 | 39970;39971;39972 | chr2:178624612;178624611;178624610 | chr2:179489339;179489338;179489337 |
N2A | 12322 | 37189;37190;37191 | chr2:178624612;178624611;178624610 | chr2:179489339;179489338;179489337 |
N2B | 5825 | 17698;17699;17700 | chr2:178624612;178624611;178624610 | chr2:179489339;179489338;179489337 |
Novex-1 | 5950 | 18073;18074;18075 | chr2:178624612;178624611;178624610 | chr2:179489339;179489338;179489337 |
Novex-2 | 6017 | 18274;18275;18276 | chr2:178624612;178624611;178624610 | chr2:179489339;179489338;179489337 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2058757156 | None | 0.244 | N | 0.233 | 0.138 | 0.158396225186 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94401E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs2058757156 | None | 0.244 | N | 0.233 | 0.138 | 0.158396225186 | gnomAD-4.0.0 | 6.58068E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94401E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs2154215014 | None | 0.784 | N | 0.513 | 0.258 | 0.452737964553 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
T/I | rs2154215014 | None | 0.784 | N | 0.513 | 0.258 | 0.452737964553 | gnomAD-4.0.0 | 6.5799E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07555E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1008 | likely_benign | 0.0827 | benign | -0.416 | Destabilizing | 0.244 | N | 0.233 | neutral | N | 0.406170775 | None | None | N |
T/C | 0.5358 | ambiguous | 0.4249 | ambiguous | -0.36 | Destabilizing | 0.995 | D | 0.399 | neutral | None | None | None | None | N |
T/D | 0.3476 | ambiguous | 0.2762 | benign | 0.429 | Stabilizing | 0.329 | N | 0.43 | neutral | None | None | None | None | N |
T/E | 0.2351 | likely_benign | 0.1751 | benign | 0.38 | Stabilizing | 0.003 | N | 0.169 | neutral | None | None | None | None | N |
T/F | 0.2974 | likely_benign | 0.2252 | benign | -0.853 | Destabilizing | 0.981 | D | 0.475 | neutral | None | None | None | None | N |
T/G | 0.3156 | likely_benign | 0.2676 | benign | -0.569 | Destabilizing | 0.495 | N | 0.431 | neutral | None | None | None | None | N |
T/H | 0.2338 | likely_benign | 0.1768 | benign | -0.763 | Destabilizing | 0.944 | D | 0.467 | neutral | None | None | None | None | N |
T/I | 0.1569 | likely_benign | 0.1244 | benign | -0.128 | Destabilizing | 0.784 | D | 0.513 | neutral | N | 0.480442911 | None | None | N |
T/K | 0.1426 | likely_benign | 0.1121 | benign | -0.302 | Destabilizing | 0.01 | N | 0.179 | neutral | N | 0.415299 | None | None | N |
T/L | 0.1315 | likely_benign | 0.1082 | benign | -0.128 | Destabilizing | 0.495 | N | 0.445 | neutral | None | None | None | None | N |
T/M | 0.1139 | likely_benign | 0.0857 | benign | -0.141 | Destabilizing | 0.944 | D | 0.414 | neutral | None | None | None | None | N |
T/N | 0.1088 | likely_benign | 0.092 | benign | -0.194 | Destabilizing | 0.704 | D | 0.317 | neutral | None | None | None | None | N |
T/P | 0.421 | ambiguous | 0.3785 | ambiguous | -0.194 | Destabilizing | 0.784 | D | 0.44 | neutral | N | 0.51318875 | None | None | N |
T/Q | 0.1647 | likely_benign | 0.1283 | benign | -0.33 | Destabilizing | 0.004 | N | 0.164 | neutral | None | None | None | None | N |
T/R | 0.1328 | likely_benign | 0.099 | benign | -0.073 | Destabilizing | 0.27 | N | 0.45 | neutral | N | 0.455167949 | None | None | N |
T/S | 0.1377 | likely_benign | 0.1146 | benign | -0.441 | Destabilizing | 0.425 | N | 0.297 | neutral | N | 0.443200879 | None | None | N |
T/V | 0.1475 | likely_benign | 0.1183 | benign | -0.194 | Destabilizing | 0.665 | D | 0.335 | neutral | None | None | None | None | N |
T/W | 0.5914 | likely_pathogenic | 0.4703 | ambiguous | -0.876 | Destabilizing | 0.995 | D | 0.441 | neutral | None | None | None | None | N |
T/Y | 0.2838 | likely_benign | 0.2221 | benign | -0.579 | Destabilizing | 0.981 | D | 0.502 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.