Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14893 | 44902;44903;44904 | chr2:178624603;178624602;178624601 | chr2:179489330;179489329;179489328 |
N2AB | 13252 | 39979;39980;39981 | chr2:178624603;178624602;178624601 | chr2:179489330;179489329;179489328 |
N2A | 12325 | 37198;37199;37200 | chr2:178624603;178624602;178624601 | chr2:179489330;179489329;179489328 |
N2B | 5828 | 17707;17708;17709 | chr2:178624603;178624602;178624601 | chr2:179489330;179489329;179489328 |
Novex-1 | 5953 | 18082;18083;18084 | chr2:178624603;178624602;178624601 | chr2:179489330;179489329;179489328 |
Novex-2 | 6020 | 18283;18284;18285 | chr2:178624603;178624602;178624601 | chr2:179489330;179489329;179489328 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.003 | N | 0.187 | 0.143 | 0.461323234107 | gnomAD-4.0.0 | 1.59357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86239E-06 | 0 | 0 |
L/P | None | None | 0.954 | N | 0.395 | 0.299 | 0.778704876926 | gnomAD-4.0.0 | 3.42315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49937E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1439 | likely_benign | 0.1369 | benign | -0.626 | Destabilizing | 0.345 | N | 0.371 | neutral | None | None | None | None | N |
L/C | 0.4403 | ambiguous | 0.3412 | ambiguous | -0.935 | Destabilizing | 0.991 | D | 0.351 | neutral | None | None | None | None | N |
L/D | 0.4525 | ambiguous | 0.3989 | ambiguous | -0.195 | Destabilizing | 0.561 | D | 0.452 | neutral | None | None | None | None | N |
L/E | 0.1875 | likely_benign | 0.1631 | benign | -0.246 | Destabilizing | 0.561 | D | 0.449 | neutral | None | None | None | None | N |
L/F | 0.1313 | likely_benign | 0.1014 | benign | -0.561 | Destabilizing | 0.003 | N | 0.187 | neutral | N | 0.452045081 | None | None | N |
L/G | 0.3126 | likely_benign | 0.2949 | benign | -0.77 | Destabilizing | 0.561 | D | 0.444 | neutral | None | None | None | None | N |
L/H | 0.1108 | likely_benign | 0.088 | benign | 0.074 | Stabilizing | None | N | 0.195 | neutral | N | 0.461197284 | None | None | N |
L/I | 0.0936 | likely_benign | 0.0832 | benign | -0.346 | Destabilizing | 0.326 | N | 0.31 | neutral | N | 0.448261878 | None | None | N |
L/K | 0.1058 | likely_benign | 0.1085 | benign | -0.456 | Destabilizing | 0.209 | N | 0.41 | neutral | None | None | None | None | N |
L/M | 0.1291 | likely_benign | 0.1153 | benign | -0.733 | Destabilizing | 0.901 | D | 0.321 | neutral | None | None | None | None | N |
L/N | 0.1892 | likely_benign | 0.1764 | benign | -0.459 | Destabilizing | 0.561 | D | 0.451 | neutral | None | None | None | None | N |
L/P | 0.1544 | likely_benign | 0.138 | benign | -0.412 | Destabilizing | 0.954 | D | 0.395 | neutral | N | 0.444675148 | None | None | N |
L/Q | 0.0756 | likely_benign | 0.0662 | benign | -0.569 | Destabilizing | 0.561 | D | 0.415 | neutral | None | None | None | None | N |
L/R | 0.0959 | likely_benign | 0.0792 | benign | -0.003 | Destabilizing | 0.001 | N | 0.192 | neutral | N | 0.340591696 | None | None | N |
L/S | 0.1561 | likely_benign | 0.1354 | benign | -0.887 | Destabilizing | 0.561 | D | 0.439 | neutral | None | None | None | None | N |
L/T | 0.1258 | likely_benign | 0.1193 | benign | -0.831 | Destabilizing | 0.722 | D | 0.419 | neutral | None | None | None | None | N |
L/V | 0.0888 | likely_benign | 0.0805 | benign | -0.412 | Destabilizing | 0.285 | N | 0.323 | neutral | N | 0.436451595 | None | None | N |
L/W | 0.2578 | likely_benign | 0.1711 | benign | -0.579 | Destabilizing | 0.991 | D | 0.341 | neutral | None | None | None | None | N |
L/Y | 0.2694 | likely_benign | 0.2173 | benign | -0.368 | Destabilizing | 0.39 | N | 0.416 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.